Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : 08G

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 40


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C12 C C1 N Y N 0 5.653 0.088 -0.336
2 C13 C C2 N Y N 0 4.197 0.108 -0.249
3 C14 C C3 N Y N 0 3.191 -0.851 -0.375
4 C15 C C4 N N N 0 3.553 -2.284 -0.67
5 C19 C C5 N Y N 0 -5.209 -0.871 -0.857
6 C20 C C6 N Y N 0 -6.454 -0.348 -1.151
7 C21 C C7 N Y N 0 -6.846 0.856 -0.596
8 C22 C C8 N Y N 0 -5.994 1.536 0.253
9 C01 C C9 N N N 0 -3.055 -1.457 1.686
10 C02 C C10 S N N 0 -3.003 -0.767 0.321
11 C04 C C11 N N N 0 -0.712 0.041 0.125
12 C07 C C12 N Y N 0 1.556 0.739 0.024
13 C08 C C13 N Y N 0 2.487 1.753 0.166
14 C09 C C14 N Y N 0 3.839 1.446 0.029
15 C18 C C15 N Y N 0 -4.358 -0.193 -0.004
16 C23 C C16 N Y N 0 -4.748 1.013 0.547
17 N03 N N1 N N N 0 -2.012 0.312 0.357
18 N06 N N2 N N N 0 0.199 1.034 0.158
19 N10 N N3 N Y N 0 5.001 2.16 0.099
20 N11 N N4 N Y N 0 6.081 1.3 -0.128
21 N17 N N5 N Y N 0 1.929 -0.509 -0.237
22 O05 O O1 N N N 0 -0.362 -1.098 -0.114
23 O16 O O2 N N N 0 3.743 -2.99 0.558
24 H1 H H1 N N N 0 6.267 -0.779 -0.534
25 H2 H H2 N N N 0 2.749 -2.752 -1.238
26 H3 H H3 N N N 0 4.474 -2.313 -1.253
27 H4 H H4 N N N 0 -4.902 -1.811 -1.291
28 H5 H H5 N N N 0 -7.12 -0.879 -1.814
29 H6 H H6 N N N 0 -7.819 1.265 -0.826
30 H7 H H7 N N N 0 -6.3 2.477 0.686
31 H8 H H8 N N N 0 -2.075 -1.872 1.921
32 H9 H H9 N N N 0 -3.335 -0.731 2.449
33 H10 H H10 N N N 0 -3.792 -2.259 1.659
34 H11 H H11 N N N 0 -2.723 -1.492 -0.443
35 H12 H H12 N N N 0 2.171 2.763 0.378
36 H13 H H13 N N N 0 -4.082 1.545 1.21
37 H14 H H14 N N N 0 -2.292 1.221 0.548
38 H15 H H15 N N N 0 -0.089 1.953 0.275
39 H16 H H16 N N N 0 5.067 3.111 0.277
40 H17 H H17 N N N 0 3.979 -3.921 0.444