Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : 09P

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 35


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 2.914 1.785 0.668
2 N1 N N1 N N N 0 4.044 1.275 -0.141
3 C2 C C2 N N N 0 4.339 -0.086 0.229
4 C3 C C3 N N N 0 3.625 -1.115 -0.674
5 C4 C C4 N N N 0 2.175 -0.69 -0.988
6 N2 N N2 N N N 0 1.499 -0.137 0.158
7 C5 C C5 N N N 0 1.622 1.339 0.153
8 C6 C C6 N Y N 0 -2.433 -1.373 0.25
9 C7 C C7 N Y N 0 -2.173 -0.027 0.031
10 C8 C C8 N Y N 0 -0.854 0.41 -0.004
11 C9 C C9 N Y N 0 0.157 -0.527 0.184
12 C10 C C10 N Y N 0 -0.185 -1.857 0.398
13 N3 N N3 N Y N 0 -1.449 -2.232 0.424
14 O1 O O1 N N N 0 -3.194 0.851 -0.148
15 C11 C C11 N N N 0 -4.521 0.322 -0.099
16 C12 C C12 N N N 0 -5.529 1.452 -0.32
17 H1 H H1 N N N 0 3.027 1.434 1.694
18 H2 H H2 N N N 0 2.94 2.875 0.663
19 H3 H H3 N N N 0 4.858 1.863 -0.037
20 H5 H H5 N N N 0 5.415 -0.245 0.162
21 H6 H H6 N N N 0 4.025 -0.247 1.261
22 H7 H H7 N N N 0 4.178 -1.211 -1.609
23 H8 H H8 N N N 0 3.611 -2.081 -0.17
24 H9 H H9 N N N 0 2.191 0.057 -1.782
25 H10 H H10 N N N 0 1.621 -1.561 -1.338
26 H11 H H11 N N N 0 0.83 1.762 0.771
27 H12 H H12 N N N 0 1.504 1.7 -0.868
28 H13 H H13 N N N 0 -3.455 -1.72 0.282
29 H14 H H14 N N N 0 -0.62 1.451 -0.172
30 H15 H H15 N N N 0 0.592 -2.592 0.545
31 H16 H H16 N N N 0 -4.641 -0.43 -0.879
32 H17 H H17 N N N 0 -4.694 -0.134 0.875
33 H18 H H18 N N N 0 -5.355 1.908 -1.295
34 H19 H H19 N N N 0 -6.541 1.048 -0.283
35 H20 H H20 N N N 0 -5.409 2.204 0.46