Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 0O5

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 53


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O19 O O19 N N N 0 1.954 -1.704 -1.504
2 C18 C C18 N N N 0 1.644 -0.728 -0.848
3 N20 N N20 N N N 0 2.6 0.05 -0.304
4 C21 C C21 N N N 0 4.014 -0.28 -0.503
5 C22 C C22 N N N 0 4.885 0.754 0.213
6 N23 N N23 N N N 0 6.302 0.424 0.013
7 C28 C C28 N N N 0 7.168 1.516 0.48
8 C24 C C24 N N N 0 8.63 1.156 0.198
9 O26 O O26 N N N 0 8.939 -0.089 0.83
10 C25 C C25 N N N 0 8.115 -1.174 0.398
11 C27 C C27 N N N 0 6.648 -0.839 0.681
12 C13 C C13 N Y N 0 0.218 -0.393 -0.651
13 C17 C C17 N Y N 0 -0.138 0.731 0.098
14 C14 C C14 N Y N 0 -1.467 1.043 0.281
15 C16 C C16 N Y N 0 -0.774 -1.196 -1.22
16 C15 C C15 N Y N 0 -2.102 -0.882 -1.036
17 C9 C C9 N Y N 0 -2.457 0.237 -0.282
18 C4 C C4 N Y N 0 -3.886 0.573 -0.085
19 N6 N N6 N Y N 0 -4.3 1.821 -0.225
20 C2 C C2 N Y N 0 -5.564 2.176 -0.061
21 C1 C C1 N N N 0 -5.945 3.622 -0.241
22 C7 C C7 N Y N 0 -4.814 -0.44 0.249
23 C12 C C12 N Y N 0 -4.432 -1.778 0.404
24 C11 C C11 N Y N 0 -5.37 -2.712 0.727
25 C10 C C10 N Y N 0 -6.706 -2.357 0.905
26 C8 C C8 N Y N 0 -7.114 -1.065 0.761
27 C5 C C5 N Y N 0 -6.174 -0.078 0.43
28 C3 C C3 N Y N 0 -6.532 1.273 0.267
29 H1 H H1 N N N 0 2.353 0.828 0.22
30 H2 H H2 N N N 0 4.217 -1.27 -0.097
31 H3 H H3 N N N 0 4.242 -0.271 -1.569
32 H4 H H4 N N N 0 4.681 1.745 -0.194
33 H5 H H5 N N N 0 4.657 0.746 1.279
34 H7 H H7 N N N 0 6.912 2.435 -0.047
35 H8 H H8 N N N 0 7.029 1.658 1.551
36 H9 H H9 N N N 0 8.782 1.066 -0.877
37 H10 H H10 N N N 0 9.279 1.937 0.594
38 H11 H H11 N N N 0 8.252 -1.332 -0.672
39 H12 H H12 N N N 0 8.392 -2.08 0.938
40 H13 H H13 N N N 0 6.5 -0.734 1.756
41 H14 H H14 N N N 0 6.012 -1.638 0.302
42 H15 H H15 N N N 0 0.628 1.355 0.535
43 H16 H H16 N N N 0 -1.742 1.912 0.86
44 H17 H H17 N N N 0 -0.499 -2.062 -1.803
45 H18 H H18 N N N 0 -2.868 -1.503 -1.476
46 H19 H H19 N N N 0 -6.215 3.8 -1.282
47 H20 H H20 N N N 0 -6.795 3.857 0.4
48 H21 H H21 N N N 0 -5.101 4.257 0.029
49 H22 H H22 N N N 0 -3.4 -2.068 0.269
50 H23 H H23 N N N 0 -5.074 -3.743 0.847
51 H24 H H24 N N N 0 -7.429 -3.118 1.16
52 H26 H H26 N N N 0 -7.557 1.589 0.396
53 H25 H H25 N N N 0 -8.152 -0.803 0.901