Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 0P2

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 49


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 2.01 0.562 0.745
2 O1 O O1 N N N 0 1.971 1.008 1.874
3 O2 O O2 N N N 0 3.187 0.179 0.212
4 C2 C C2 N N N 0 4.366 0.328 1.045
5 C3 C C3 N Y N 0 5.579 -0.147 0.288
6 C4 C C4 N Y N 0 6.3 0.739 -0.49
7 C5 C C5 N Y N 0 7.412 0.303 -1.185
8 C6 C C6 N Y N 0 7.805 -1.02 -1.101
9 C7 C C7 N Y N 0 7.085 -1.906 -0.322
10 C8 C C8 N Y N 0 5.975 -1.469 0.376
11 N N N1 N N N 0 0.876 0.444 0.026
12 CA C C9 S N N 0 -0.405 0.855 0.608
13 C C C10 N N N 0 -1.525 0.103 -0.064
14 O O O3 N N N 0 -1.278 -0.697 -0.942
15 CB C C11 N N N 0 -0.601 2.358 0.398
16 N1 N N2 N N N 0 -2.801 0.32 0.311
17 CA1 C C12 R N N 0 -3.891 -0.411 -0.342
18 CB1 C C13 S N N 0 -4.868 -0.923 0.718
19 CG1 C C14 N N N 0 -6.006 -1.686 0.036
20 CG2 C C15 N N N 0 -5.444 0.262 1.496
21 CD1 C C16 N N N 0 -6.915 -2.303 1.1
22 B B B1 N N N 0 -4.645 0.548 -1.331
23 O11 O O5 N N N 0 -5.263 0.022 -2.496
24 O21 O O6 N N Y 0 -4.709 1.94 -1.059
25 H21 H H2 N N N 0 4.493 1.378 1.311
26 H22 H H3 N N N 0 4.249 -0.265 1.952
27 H41 H H4 N N N 0 5.994 1.773 -0.556
28 H51 H H5 N N N 0 7.975 0.995 -1.794
29 H61 H H6 N N N 0 8.674 -1.361 -1.645
30 H71 H H7 N N N 0 7.391 -2.94 -0.257
31 H81 H H8 N N N 0 5.414 -2.161 0.987
32 H H H9 N N N 0 0.907 0.088 -0.875
33 HA H H11 N N N 0 -0.407 0.633 1.675
34 HB1 H H12 N N N 0 -0.599 2.579 -0.669
35 HB2 H H13 N N N 0 -1.554 2.663 0.831
36 HB3 H H14 N N N 0 0.209 2.901 0.884
37 HN2 H H17 N N N 0 -2.999 0.959 1.013
38 HA1 H H18 N N N 0 -3.481 -1.255 -0.896
39 HB H H19 N N N 0 -4.345 -1.588 1.404
40 HG11 H H20 N N N 0 -6.584 -0.999 -0.582
41 HG12 H H21 N N N 0 -5.59 -2.476 -0.589
42 HG21 H H22 N N N 0 -5.967 0.928 0.809
43 HG22 H H23 N N N 0 -6.14 -0.102 2.251
44 HG23 H H24 N N N 0 -4.633 0.806 1.982
45 HD11 H H25 N N N 0 -6.337 -2.99 1.719
46 HD12 H H26 N N N 0 -7.331 -1.513 1.725
47 HD13 H H27 N N N 0 -7.726 -2.847 0.614
48 HO1 H H28 N N N 0 -5.166 -0.935 -2.595
49 HO2 H H29 N N Y 0 -4.26 2.203 -0.244