Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 18J

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 44


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C2 C C2 N Y N 0 -6.148 0.009 0.289
2 C3 C C3 N Y N 0 -5.593 -1.263 0.239
3 C4 C C4 N Y N 0 -4.236 -1.418 0.054
4 C5 C C5 N Y N 0 -3.418 -0.292 -0.083
5 C6 C C6 N Y N 0 -3.982 0.986 -0.032
6 C7 C C7 N Y N 0 -5.34 1.131 0.153
7 C8 C C8 N N N 0 -5.949 2.508 0.207
8 C25 C C25 N N N 0 6.131 0.757 2.459
9 C24 C C24 N N N 0 5.194 0.982 1.271
10 S21 S S21 N N N 0 5.34 -0.407 0.113
11 O23 O O23 N N N 0 6.647 -0.46 -0.44
12 O22 O O22 N N N 0 4.723 -1.57 0.65
13 N20 N N20 N N N 0 4.373 0.015 -1.163
14 C17 C C17 N Y N 0 2.999 0.168 -0.977
15 C18 C C18 N Y N 0 2.442 1.441 -0.928
16 C19 C C19 N Y N 0 1.085 1.595 -0.745
17 C14 C C14 N Y N 0 0.268 0.47 -0.608
18 C15 C C15 N Y N 0 0.831 -0.809 -0.657
19 C16 C C16 N Y N 0 2.188 -0.955 -0.846
20 C12 C C12 N N N 0 -1.183 0.63 -0.411
21 C11 C C11 N N N 0 -1.967 -0.453 -0.279
22 O1 O O1 N N N 0 -7.487 0.157 0.465
23 C10 C C10 N N N 0 -6.475 -2.475 0.387
24 H1 H H1 N N N 0 -3.805 -2.407 0.017
25 H2 H H2 N N N 0 -3.354 1.858 -0.138
26 H3 H H3 N N N 0 -5.955 2.862 1.238
27 H4 H H4 N N N 0 -5.361 3.19 -0.408
28 H5 H H5 N N N 0 -6.971 2.469 -0.17
29 H6 H H6 N N N 0 7.159 0.687 2.103
30 H7 H H7 N N N 0 6.044 1.591 3.154
31 H8 H H8 N N N 0 5.859 -0.169 2.966
32 H9 H H9 N N N 0 4.166 1.052 1.627
33 H10 H H10 N N N 0 5.467 1.908 0.764
34 H11 H H11 N N N 0 4.762 0.157 -2.04
35 H12 H H12 N N N 0 3.074 2.31 -1.034
36 H13 H H13 N N N 0 0.654 2.585 -0.707
37 H14 H H14 N N N 0 0.203 -1.681 -0.551
38 H15 H H15 N N N 0 2.624 -1.942 -0.885
39 H16 H H16 N N N 0 -1.617 1.618 -0.373
40 H17 H H17 N N N 0 -1.533 -1.441 -0.318
41 H18 H H18 N N N 0 -7.757 0.217 1.392
42 H19 H H19 N N N 0 -6.829 -2.789 -0.595
43 H20 H H20 N N N 0 -5.907 -3.285 0.844
44 H21 H H21 N N N 0 -7.329 -2.228 1.019