Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 19L

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 55


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C C C N N N 0 -6.566 1.296 1.297
2 N N N N N N 0 -7.056 2.412 1.913
3 O O O N N N 0 -7.747 -1.757 0.278
4 C1 C C1 N N N 0 -6.973 -0.835 0.475
5 N1 N N1 N N N 0 -7.386 0.29 1.074
6 C2 C C2 N Y N 0 -5.557 -0.932 0.059
7 N2 N N2 N N N 0 -5.252 1.271 0.951
8 O1 O O1 N N N 0 -1.105 -2.014 -1.589
9 C3 C C3 N Y N 0 -4.715 0.167 0.322
10 N3 N N3 N Y N 0 -3.442 0.12 -0.034
11 C4 C C4 N Y N 0 -2.968 -0.965 -0.637
12 N4 N N4 N Y N 0 -5.077 -2.013 -0.538
13 C5 C C5 N Y N 0 -3.807 -2.054 -0.891
14 C6 C C6 N N N 0 -1.541 -1.023 -1.037
15 N5 N N5 N N N 0 -0.729 0.023 -0.789
16 C7 C C7 S N N 0 0.681 -0.035 -1.185
17 C9 C C9 N N N 0 1.486 0.893 -0.312
18 O3 O O3 N N N 0 0.936 1.539 0.555
19 C8 C C8 N N N 0 0.818 0.394 -2.647
20 O2 O O2 N N N 0 0.444 1.767 -2.779
21 N6 N N6 N N N 0 2.816 1.005 -0.495
22 C10 C C10 S N N 0 3.599 1.907 0.354
23 C20 C C20 N N N 0 3.549 3.302 -0.215
24 O4 O O4 N N N 0 2.924 3.52 -1.226
25 C11 C C11 N N N 0 5.051 1.429 0.403
26 C12 C C12 N Y N 0 5.115 0.086 1.084
27 C13 C C13 N Y N 0 5.369 -0.14 2.383
28 C15 C C15 N Y N 0 4.904 -1.221 0.456
29 N7 N N7 N Y N 0 5.344 -1.484 2.636
30 C14 C C14 N Y N 0 5.056 -2.174 1.48
31 C16 C C16 N Y N 0 4.609 -1.636 -0.844
32 C19 C C19 N Y N 0 4.911 -3.524 1.181
33 C17 C C17 N Y N 0 4.471 -2.968 -1.115
34 C18 C C18 N Y N 0 4.621 -3.912 -0.109
35 O5 O O5 N N N 0 4.199 4.302 0.4
36 H1 H H1 N N N 0 -7.989 2.451 2.175
37 H2 H H2 N N N 0 -6.471 3.165 2.091
38 H20 H H20 N N N 0 -4.689 2.038 1.141
39 H19 H H19 N N N 0 -3.413 -2.934 -1.378
40 H18 H H18 N N N 0 -1.077 0.814 -0.349
41 H14 H H14 N N N 0 1.049 -1.054 -1.069
42 H15 H H15 N N N 0 1.852 0.266 -2.968
43 H16 H H16 N N N 0 0.167 -0.221 -3.269
44 H17 H H17 N N N 0 0.507 2.107 -3.681
45 H13 H H13 N N N 0 3.256 0.489 -1.189
46 H4 H H4 N N N 0 3.183 1.911 1.361
47 H5 H H5 N N N 0 5.44 1.34 -0.611
48 H6 H H6 N N N 0 5.652 2.147 0.961
49 H12 H H12 N N N 0 5.565 0.626 3.118
50 H11 H H11 N N N 0 5.499 -1.891 3.503
51 H7 H H7 N N N 0 4.491 -0.907 -1.632
52 H10 H H10 N N N 0 5.026 -4.266 1.957
53 H8 H H8 N N N 0 4.243 -3.289 -2.121
54 H9 H H9 N N N 0 4.509 -4.961 -0.339
55 H3 H H3 N N N 0 4.137 5.179 -0.002