Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 1CZ

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 102


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O4 O O4 N N N 0 -13.995 5.794 0.407
2 C5 C C5 N N N 0 -14.687 4.655 0.249
3 O3 O O3 N N N 0 -15.72 4.487 0.854
4 C4 C C4 N N N 0 -14.177 3.586 -0.682
5 C3 C C3 S N N 0 -15.145 2.401 -0.678
6 O7 O O7 N N N 0 -15.328 1.94 0.662
7 C6 C C6 N N N 0 -16.492 2.842 -1.254
8 C2 C C2 N N N 0 -14.571 1.27 -1.533
9 C1 C C1 N N N 0 -13.233 0.851 -0.979
10 S2P S S2P N N N 0 -12.684 1.495 0.509
11 S1P S S1P N N N 0 -12.263 -0.268 -1.839
12 C2P C C2P N N N 0 -10.842 -0.373 -0.723
13 C3P C C3P N N N 0 -9.811 -1.345 -1.301
14 N4P N N4P N N N 0 -8.66 -1.43 -0.398
15 C5P C C5P N N N 0 -7.621 -2.231 -0.704
16 O5P O O5P N N N 0 -7.639 -2.883 -1.727
17 C6P C C6P N N N 0 -6.438 -2.319 0.224
18 C7P C C7P N N N 0 -5.407 -3.291 -0.353
19 N8P N N8P N N N 0 -4.256 -3.376 0.55
20 C9P C C9P N N N 0 -3.217 -4.178 0.243
21 O9P O O9P N N N 0 -3.189 -4.752 -0.825
22 C10 C C10 R N N 0 -2.091 -4.361 1.228
23 O10 O O10 N N N 0 -2.437 -3.742 2.468
24 C11 C C11 N N N 0 -0.819 -3.715 0.673
25 C13 C C13 N N N 0 -0.444 -4.382 -0.651
26 C14 C C14 N N N 0 -1.065 -2.223 0.441
27 C12 C C12 N N N 0 0.322 -3.894 1.676
28 O6A O O6A N N N 0 1.51 -3.291 1.158
29 P2A P P2A N N N 0 2.911 -3.289 1.952
30 O5A O O5A N N N 0 3.283 -4.68 2.298
31 O4A O O4A N N N 0 2.762 -2.423 3.301
32 O3A O O3A N N N 0 4.054 -2.643 1.022
33 P1A P P1A N N N 0 5.663 -2.706 1.02
34 O1A O O1A N N N 0 6.146 -4.083 0.34
35 O2A O O2A N N N 0 6.161 -2.643 2.413
36 O5' O O5* N N N 0 6.248 -1.461 0.185
37 C5' C C5* N N N 0 7.645 -1.177 0.086
38 C4' C C4* R N N 0 7.853 0.069 -0.777
39 C3' C C3* S N N 0 9.36 0.321 -0.979
40 O3' O O3* N N N 0 9.692 0.282 -2.368
41 P3' P P3* N N N 0 10.745 -0.766 -2.989
42 O9A O O9A N N N 0 10.338 -2.144 -2.633
43 O8A O O8A N N N 0 10.775 -0.612 -4.591
44 O7A O O7A N N N 0 12.212 -0.469 -2.394
45 C2' C C2* R N N 0 9.587 1.742 -0.407
46 O2' O O2* N N N 0 10.478 2.489 -1.237
47 C1' C C1* R N N 0 8.158 2.341 -0.451
48 O4' O O4* N N N 0 7.312 1.222 -0.11
49 N9A N N9A N Y N 0 8.019 3.416 0.535
50 C8A C C8A N Y N 0 7.528 3.291 1.801
51 N7A N N7A N Y N 0 7.547 4.445 2.401
52 C5A C C5A N Y N 0 8.05 5.382 1.561
53 C4A C C4A N Y N 0 8.364 4.732 0.356
54 C6A C C6A N Y N 0 8.301 6.761 1.655
55 N6A N N6A N N N 0 8.018 7.455 2.819
56 N1A N N1A N Y N 0 8.817 7.385 0.601
57 C2A C C2A N Y N 0 9.09 6.732 -0.513
58 N3A N N3A N Y N 0 8.884 5.438 -0.643
59 H1 H H1 N N N 0 -14.362 6.451 1.015
60 H2 H H2 N N N 0 -14.101 3.99 -1.692
61 H3 H H3 N N N 0 -13.194 3.253 -0.349
62 H4 H H4 N N N 0 -14.502 1.789 1.142
63 H5 H H5 N N N 0 -16.338 3.301 -2.23
64 H6 H H6 N N N 0 -17.144 1.975 -1.359
65 H7 H H7 N N N 0 -16.956 3.565 -0.582
66 H8 H H8 N N N 0 -15.253 0.42 -1.518
67 H9 H H9 N N N 0 -14.446 1.617 -2.559
68 H10 H H10 N N N 0 -10.39 0.614 -0.616
69 H11 H H11 N N N 0 -11.171 -0.729 0.253
70 H12 H H12 N N N 0 -10.262 -2.331 -1.408
71 H13 H H13 N N N 0 -9.482 -0.988 -2.276
72 H14 H H14 N N N 0 -8.646 -0.909 0.42
73 H15 H H15 N N N 0 -5.986 -1.332 0.332
74 H16 H H16 N N N 0 -6.767 -2.676 1.2
75 H17 H H17 N N N 0 -5.858 -4.278 -0.46
76 H18 H H18 N N N 0 -5.078 -2.934 -1.329
77 H19 H H19 N N N 0 -4.242 -2.855 1.368
78 H20 H H20 N N N 0 -1.918 -5.425 1.388
79 H21 H H21 N N N 0 -2.606 -2.793 2.401
80 H22 H H22 N N N 0 -1.198 -4.148 -1.403
81 H23 H H23 N N N 0 0.526 -4.012 -0.983
82 H24 H H24 N N N 0 -0.392 -5.462 -0.512
83 H28 H H28 N N N 0 0.055 -3.418 2.62
84 H25 H H25 N N N 0 -1.332 -1.747 1.385
85 H26 H H26 N N N 0 -0.159 -1.763 0.046
86 H27 H H27 N N N 0 -1.878 -2.095 -0.273
87 H29 H H29 N N N 0 0.497 -4.957 1.842
88 H30 H H30 N N N 0 2.519 -1.499 3.15
89 H31 H H31 N N N 0 5.855 -4.192 -0.576
90 H32 H H32 N N N 0 8.052 -1.001 1.082
91 H33 H H33 N N N 0 8.157 -2.025 -0.37
92 H34 H H34 N N N 0 7.365 -0.064 -1.743
93 H35 H H35 N N N 0 9.947 -0.412 -0.426
94 H39 H H39 N N N 0 10.652 3.386 -0.921
95 H36 H H36 N N N 0 11.389 -1.214 -5.033
96 H37 H H37 N N N 0 12.543 0.418 -2.589
97 H38 H H38 N N N 0 9.958 1.695 0.616
98 H40 H H40 N N N 0 7.925 2.707 -1.451
99 H41 H H41 N N N 0 7.176 2.37 2.24
100 H42 H H42 N N N 0 7.642 6.988 3.582
101 H43 H H43 N N N 0 8.196 8.407 2.872
102 H44 H H44 N N N 0 9.509 7.277 -1.346