Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 1DF

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 22


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 1.29 0.546 0.003
2 CO1 C CO1 N Y N 0 0.067 1.222 -0.001
3 CO2 C CO2 N Y N 0 1.312 -0.852 -0.002
4 CM1 C CM1 N Y N 0 -1.113 0.511 -0.004
5 CM2 C CM2 N Y N 0 0.125 -1.558 -0.01
6 O1 O O1 N N N 0 2.531 2.652 0.005
7 OM O OM N N N 0 0.143 -2.918 -0.008
8 CZ C CZ N Y N 0 -1.091 -0.877 -0.003
9 CC C CC N N N 0 2.554 1.305 0.006
10 CV C CV N N N 0 1.425 -3.55 -0.016
11 O2 O O2 N N N 0 3.617 0.716 0.01
12 O3 O O3 N N N 0 -2.257 -1.573 -0.011
13 N N N N N N 1 -2.408 1.229 -0.008
14 O11 O O11 N N N 0 -3.452 0.602 -0.011
15 O22 O O22 N N N -1 -2.429 2.447 -0.009
16 H1 H H1 N N N 0 0.047 2.302 -0.002
17 H2 H H2 N N N 0 2.255 -1.378 0.001
18 H3 H H3 N N N 0 1.972 -3.251 -0.91
19 H4 H H4 N N N 0 1.984 -3.248 0.87
20 H5 H H5 N N N 0 1.297 -4.632 -0.014
21 H6 H H6 N N N 0 3.385 3.106 0.007
22 H7 H H7 N N N 0 -2.595 -1.785 0.87