Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 1HE

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 96


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C4 C C4 N Y N 0 -7.039 4.947 -0.3
2 C5 C C5 N Y N 0 -6.958 5.604 -1.539
3 C6 C C6 N Y N 0 -7.023 7.008 -1.551
4 C8 C C8 N Y N 0 -6.822 3.475 -1.927
5 N1 N N1 N Y N 0 -7.159 7.646 -0.393
6 N3 N N3 N Y N 0 -7.169 5.671 0.808
7 NBC N NBC N N N 0 9.258 -0.837 0.272
8 CBN C CBN N N N 0 8.275 -1.646 0.715
9 OAF O OAF N N N 0 8.27 -2.019 1.869
10 CAW C CAW N N N 0 7.182 -2.088 -0.224
11 CAU C CAU N N N 0 6.202 -2.993 0.524
12 NBD N NBD N N N 0 5.139 -3.423 -0.389
13 CBO C CBO N N N 0 4.156 -4.232 0.054
14 OAG O OAG N N N 0 4.201 -4.679 1.181
15 CBT C CBT R N N 0 3.003 -4.58 -0.85
16 OAL O OAL N N N 0 3.304 -4.171 -2.186
17 CBY C CBY N N N 0 1.742 -3.861 -0.368
18 CAB C CAB N N N 0 1.334 -4.407 1.001
19 CAZ C CAZ N N N 0 0.607 -4.094 -1.368
20 CAC C CAC N N N 0 2.022 -2.361 -0.257
21 OBG O OBG N N N 0 -0.571 -3.422 -0.919
22 PCB P PCB N N N 0 -1.962 -3.453 -1.729
23 OAP O OAP N N N 0 -1.776 -2.704 -3.142
24 OAJ O OAJ N N N 0 -2.365 -4.857 -1.964
25 OBJ O OBJ N N N 0 -3.099 -2.704 -0.87
26 PCA P PCA N N N 0 -4.709 -2.728 -0.886
27 OAO O OAO N N N 0 -5.234 -4.032 -0.101
28 OAI O OAI N N N 0 -5.189 -2.769 -2.285
29 O5' O O5' N N N 0 -5.273 -1.404 -0.163
30 C5' C C5' N N N 0 -6.663 -1.08 -0.107
31 C4' C C4' R N N 0 -6.85 0.237 0.648
32 O4' O O4' N N N 0 -6.34 1.34 -0.133
33 C3' C C3' S N N 0 -8.353 0.545 0.83
34 O3' O O3' N N N 0 -8.79 0.152 2.133
35 PBZ P PBZ N N N 0 -9.949 -0.938 2.377
36 OAM O OAM N N N 0 -10.27 -1.036 3.951
37 OAN O OAN N N N 0 -11.171 -0.531 1.648
38 OAH O OAH N N N 0 -9.457 -2.374 1.84
39 C2' C C2' R N N 0 -8.445 2.078 0.664
40 O2' O O2' N N N 0 -8.941 2.682 1.86
41 C1' C C1' R N N 0 -6.987 2.516 0.401
42 N9 N N9 N Y N 0 -6.951 3.606 -0.576
43 N7 N N7 N Y N 0 -6.826 4.648 -2.49
44 C2 C C2 N Y N 0 -7.231 6.984 0.748
45 N6 N N6 N N N 0 -6.948 7.71 -2.741
46 CAA C CAA N N N 0 17.526 5.183 -0.999
47 SBK S SBK N N N 0 16.924 4.305 0.469
48 CAQ C CAQ N N N 0 15.425 3.48 -0.134
49 CAR C CAR N N N 0 14.788 2.683 1.005
50 CBM C CBM N N N 0 13.542 1.998 0.504
51 OAE O OAE N N N 0 13.199 2.134 -0.652
52 SBL S SBL N N N 0 12.613 1.028 1.565
53 CAV C CAV N N N 0 11.301 0.497 0.437
54 CAT C CAT N N N 0 10.32 -0.408 1.185
55 H1 H H1 N N N 0 -6.73 2.536 -2.452
56 H2 H H2 N N N 0 9.262 -0.54 -0.651
57 H3 H H3 N N N 0 6.653 -1.214 -0.603
58 H4 H H4 N N N 0 7.62 -2.638 -1.058
59 H5 H H5 N N N 0 6.731 -3.868 0.903
60 H6 H H6 N N N 0 5.764 -2.444 1.358
61 H7 H H7 N N N 0 5.143 -3.125 -1.312
62 H8 H H8 N N N 0 2.837 -5.657 -0.829
63 H9 H H9 N N N 0 3.464 -3.222 -2.28
64 H10 H H10 N N N 0 0.394 -3.951 1.31
65 H14 H H14 N N N 0 2.83 -2.194 0.456
66 H11 H H11 N N N 0 1.21 -5.488 0.939
67 H12 H H12 N N N 0 2.109 -4.172 1.731
68 H13 H H13 N N N 0 1.123 -1.848 0.087
69 H15 H H15 N N N 0 2.312 -1.971 -1.232
70 H16 H H16 N N N 0 0.897 -3.705 -2.344
71 H17 H H17 N N N 0 0.408 -5.163 -1.448
72 H18 H H18 N N N 0 -1.512 -1.777 -3.064
73 H19 H H19 N N N 0 -4.957 -4.073 0.825
74 H20 H H20 N N N 0 -7.053 -0.977 -1.12
75 H21 H H21 N N N 0 -7.201 -1.875 0.41
76 H22 H H22 N N N 0 -6.351 0.193 1.616
77 H23 H H23 N N N 0 -8.941 0.041 0.063
78 H24 H H24 N N N 0 -10.961 -1.676 4.173
79 H25 H H25 N N N 0 -8.658 -2.704 2.274
80 H26 H H26 N N N 0 -9.081 2.333 -0.184
81 H27 H H27 N N N 0 -9.02 3.645 1.811
82 H28 H H28 N N N 0 -6.51 2.823 1.332
83 H29 H H29 N N N 0 -7.34 7.542 1.666
84 H30 H H30 N N N 0 -6.849 7.234 -3.58
85 H31 H H31 N N N 0 -6.994 8.679 -2.737
86 H32 H H32 N N N 0 17.734 4.465 -1.793
87 H33 H H33 N N N 0 16.767 5.889 -1.337
88 H34 H H34 N N N 0 18.439 5.724 -0.75
89 H35 H H35 N N N 0 14.719 4.228 -0.494
90 H36 H H36 N N N 0 15.685 2.805 -0.949
91 H37 H H37 N N N 0 15.494 1.935 1.365
92 H38 H H38 N N N 0 14.527 3.359 1.82
93 H39 H H39 N N N 0 10.771 1.372 0.058
94 H40 H H40 N N N 0 11.738 -0.052 -0.397
95 H41 H H41 N N N 0 9.882 0.141 2.019
96 H42 H H42 N N N 0 10.849 -1.283 1.564