Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : 1WM

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 55


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O01 O O01 N N N 0 6.838 4.056 -0.551
2 N02 N N02 N N N 0 6.403 2.807 -0.046
3 C03 C C03 N N N 0 5.285 2.235 -0.536
4 C07 C C07 N N N 0 2.623 1.131 0.791
5 O04 O O04 N N N 0 4.604 2.829 -1.345
6 C05 C C05 S N N 0 4.882 0.857 -0.08
7 N06 N N06 N N N 0 3.43 0.707 -0.202
8 O08 O O08 N N N 0 3.1 1.638 1.788
9 C09 C C09 N Y N 0 1.16 0.98 0.668
10 C10 C C10 N Y N 0 0.323 1.42 1.698
11 C11 C C11 N Y N 0 -1.03 1.281 1.586
12 C12 C C12 N Y N 0 -1.58 0.697 0.437
13 C13 C C13 N N N 0 -3.0 0.551 0.318
14 C14 C C14 N N N 0 -4.164 0.432 0.22
15 C18 C C18 N Y N 0 -8.663 -0.558 -1.26
16 C15 C C15 N N N 0 -5.529 0.291 0.105
17 C16 C C16 N N N 0 -6.692 0.172 0.006
18 C17 C C17 N Y N 0 -8.112 0.026 -0.113
19 C19 C C19 N Y N 0 -10.028 -0.696 -1.371
20 C20 C C20 N Y N 0 -10.86 -0.257 -0.345
21 N21 N N21 N N N 0 -12.242 -0.4 -0.461
22 C22 C C22 N Y N 0 -10.316 0.323 0.798
23 C23 C C23 N Y N 0 -8.952 0.461 0.919
24 C24 C C24 N Y N 0 -0.741 0.257 -0.594
25 C25 C C25 N Y N 0 0.612 0.402 -0.482
26 C26 C C26 S N N 0 5.578 -0.192 -0.949
27 O27 O O27 N N N 0 6.994 -0.065 -0.808
28 C29 C C29 N Y N 0 5.152 -1.57 -0.512
29 C30 C C30 N Y N 0 5.743 -2.158 0.592
30 C31 C C31 N Y N 0 5.354 -3.42 0.995
31 C32 C C32 N Y N 0 4.37 -4.099 0.291
32 O33 O O33 N N N 0 3.985 -5.342 0.686
33 C34 C C34 N Y N 0 3.778 -3.508 -0.815
34 C35 C C35 N Y N 0 4.167 -2.243 -1.211
35 H1 H H1 N N N 0 7.648 4.387 -0.139
36 H2 H H2 N N N 0 6.908 2.364 0.653
37 H3 H H3 N N N 0 5.175 0.718 0.961
38 H4 H H4 N N N 0 3.049 0.302 -0.997
39 H5 H H5 N N N 0 0.748 1.87 2.584
40 H6 H H6 N N N 0 -1.676 1.621 2.382
41 H7 H H7 N N N 0 -8.019 -0.898 -2.057
42 H8 H H8 N N N 0 -10.455 -1.146 -2.255
43 H9 H H9 N N N 0 -12.622 -0.804 -1.256
44 H10 H H10 N N N 0 -12.822 -0.094 0.253
45 H11 H H11 N N N 0 -10.965 0.661 1.592
46 H12 H H12 N N N 0 -8.53 0.911 1.806
47 H13 H H13 N N N 0 -1.164 -0.193 -1.48
48 H16 H H16 N N N 0 7.312 -0.188 0.097
49 H14 H H14 N N N 0 1.259 0.063 -1.277
50 H15 H H15 N N N 0 5.301 -0.041 -1.993
51 H17 H H17 N N N 0 6.509 -1.628 1.139
52 H18 H H18 N N N 0 5.816 -3.879 1.856
53 H21 H H21 N N N 0 3.704 -1.78 -2.07
54 H19 H H19 N N N 0 3.256 -5.345 1.321
55 H20 H H20 N N N 0 3.012 -4.035 -1.365