Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 22D

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 35


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C7 C C7 N Y N 0 -1.731 1.956 -0.121
2 N8 N N8 N Y N 0 -3.012 2.034 0.184
3 C8A C C8A N Y N 0 -3.772 0.94 0.124
4 N1 N N1 N N N 0 -5.082 0.977 0.427
5 C2 C C2 N N N 0 -5.834 -0.094 0.37
6 N2 N N2 N N N 0 -7.161 0.021 0.693
7 N3 N N3 N N N 0 -5.359 -1.319 0.005
8 C4 C C4 N N N 0 -4.055 -1.479 -0.322
9 O4 O O4 N N N 0 -3.615 -2.565 -0.65
10 C4A C C4A N Y N 0 -3.189 -0.289 -0.265
11 N5 N N5 N Y N 0 -1.9 -0.348 -0.567
12 C6 C C6 N Y N 0 -1.165 0.744 -0.504
13 C9 C C9 N N N 0 0.3 0.681 -0.853
14 N10 N N10 N N N 0 1.066 0.269 0.326
15 CBX C CBX N Y N 0 2.447 0.14 0.247
16 CAR C CAR N Y N 0 3.174 -0.252 1.368
17 CAT C CAT N Y N 0 4.537 -0.38 1.293
18 CAQ C CAQ N Y N 0 3.102 0.397 -0.955
19 CAS C CAS N Y N 0 4.464 0.265 -1.038
20 CBY C CBY N Y N 0 5.198 -0.117 0.089
21 CBV C CBV N N N 0 6.662 -0.261 0.004
22 OAJ O OAJ N N N 0 7.233 -0.047 -1.048
23 H1 H H1 N N N 0 -1.117 2.843 -0.078
24 H2 H H2 N N N 0 -7.523 0.882 0.956
25 H3 H H3 N N N 0 -7.738 -0.758 0.659
26 H4 H H4 N N N 0 -5.959 -2.081 -0.02
27 H5 H H5 N N N 0 0.451 -0.041 -1.656
28 H6 H H6 N N N 0 0.638 1.664 -1.18
29 H7 H H7 N N N 0 0.609 0.086 1.161
30 H8 H H8 N N N 0 2.663 -0.455 2.298
31 H9 H H9 N N N 0 5.1 -0.684 2.164
32 H10 H H10 N N N 0 2.535 0.701 -1.823
33 H11 H H11 N N N 0 4.971 0.469 -1.97
34 OXT O OXT N N Y 0 7.368 -0.629 1.091
35 HXT H HXT N N Y 0 8.325 -0.71 0.986