Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : 29F

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 39


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C C C N N N 0 5.393 0.954 1.249
2 N N N N N N 0 -1.367 -1.463 0.0
3 O O O N N N 0 -3.231 -2.708 0.001
4 C1 C C1 N N N 0 4.936 0.198 0.001
5 N1 N N1 N N N 0 -1.508 0.885 0.001
6 C2 C C2 N N N 0 5.393 0.953 -1.249
7 C3 C C3 N N N 0 5.549 -1.205 0.001
8 C4 C C4 N Y N 0 3.433 0.089 0.001
9 C5 C C5 N Y N 0 2.66 1.236 0.0
10 C6 C C6 N Y N 0 1.283 1.144 0.0
11 C7 C C7 N Y N 0 0.671 -0.11 0.0
12 C8 C C8 N Y N 0 1.457 -1.264 0.001
13 C9 C C9 N Y N 0 2.833 -1.158 -0.004
14 C10 C C10 N N N 0 -0.803 -0.217 0.0
15 C11 C C11 N N N 0 -2.713 -1.607 0.0
16 C12 C C12 N Y N 0 -3.526 -0.381 0.0
17 C13 C C13 N Y N 0 -4.918 -0.424 0.0
18 C14 C C14 N Y N 0 -5.634 0.754 0.0
19 C15 C C15 N Y N 0 -4.98 1.979 -0.001
20 C16 C C16 N Y N 0 -3.605 2.044 -0.001
21 C17 C C17 N Y N 0 -2.856 0.864 0.001
22 H H H N N N 0 4.957 1.953 1.249
23 HA H HA N N N 0 5.068 0.416 2.14
24 HB H HB N N N 0 6.48 1.033 1.249
25 HN H HN N N N 0 -0.799 -2.249 -0.004
26 H2 H H2 N N N 0 6.48 1.031 -1.249
27 H2A H H2A N N N 0 5.068 0.414 -2.139
28 H2B H H2B N N N 0 4.957 1.952 -1.25
29 H3 H H3 N N N 0 5.223 -1.743 0.891
30 H3A H H3A N N N 0 5.223 -1.744 -0.889
31 H3B H H3B N N N 0 6.636 -1.126 0.001
32 H5 H H5 N N N 0 3.135 2.206 0.001
33 H6 H H6 N N N 0 0.681 2.04 0.0
34 H8 H H8 N N N 0 0.99 -2.237 0.001
35 H9 H H9 N N N 0 3.442 -2.049 -0.009
36 H13 H H13 N N N 0 -5.433 -1.373 0.0
37 H14 H H14 N N N 0 -6.714 0.724 -0.001
38 H15 H H15 N N N 0 -5.557 2.891 -0.002
39 H16 H H16 N N N 0 -3.107 3.003 -0.001