Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 37Y

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 90


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C2 C C2 N N N 0 -4.753 -1.039 0.315
2 O3 O O3 N N N 0 -4.703 -1.947 1.117
3 C4 C C4 N N N 0 -6.006 -0.814 -0.491
4 N5 N N5 N N N 0 -7.01 -1.823 -0.127
5 N1 N N1 N N N 0 -3.69 -0.227 0.148
6 O8 O O8 N N N 0 -9.544 -2.719 0.689
7 C6 C C6 N N N 0 -7.458 -1.644 1.262
8 C10 C C10 N N N 0 -8.152 -1.788 -1.052
9 C7 C C7 N N N 0 -8.456 -2.749 1.617
10 C9 C C9 N N N 0 -9.143 -2.892 -0.673
11 C11 C C11 R N N 0 -2.471 -0.445 0.931
12 C12 C C12 N N N 0 -2.605 0.251 2.287
13 C13 C C13 N N N 0 -1.289 0.122 0.189
14 O14 O O14 N N N 0 -1.448 0.656 -0.888
15 N15 N N15 N N N 0 -0.054 0.036 0.722
16 C16 C C16 S N N 0 1.096 0.587 0.001
17 C17 C C17 N N N 0 1.225 2.08 0.312
18 C18 C C18 N Y N 0 0.025 2.812 -0.231
19 C19 C C19 N Y N 0 0.045 3.309 -1.521
20 C20 C C20 N Y N 0 -1.053 3.98 -2.021
21 C21 C C21 N Y N 0 -2.178 4.155 -1.228
22 O27 O O27 N N N 0 2.29 -1.009 1.264
23 O22 O O22 N N N 0 -3.261 4.815 -1.719
24 C23 C C23 N N N 0 -4.383 4.957 -0.846
25 C24 C C24 N Y N 0 -2.197 3.655 0.065
26 C25 C C25 N Y N 0 -1.097 2.98 0.559
27 C26 C C26 N N N 0 2.35 -0.127 0.434
28 N28 N N28 N N N 0 3.539 0.215 -0.1
29 C29 C C29 S N N 0 4.759 -0.479 0.321
30 C30 C C30 N N N 0 5.806 -0.39 -0.791
31 C41 C C41 N N N 0 5.302 -1.14 -2.026
32 C42 C C42 N N N 0 6.283 -0.934 -3.182
33 C43 C C43 N N N 0 5.78 -1.683 -4.418
34 C44 C C44 N N N 0 5.672 -3.176 -4.1
35 C45 C C45 N N N 0 4.692 -3.382 -2.943
36 C46 C C46 N N N 0 5.195 -2.632 -1.708
37 C31 C C31 N N N 0 5.298 0.167 1.571
38 O32 O O32 N N N 0 4.898 1.256 1.909
39 C37 C C37 R N N 0 6.336 -0.545 2.4
40 C38 C C38 N N N 0 5.644 -1.504 3.37
41 C39 C C39 N N N 0 7.149 0.482 3.191
42 O40 O O40 N N N 0 8.207 -0.182 3.885
43 H1 H H1 N N N 0 -6.399 0.181 -0.282
44 H2 H H2 N N N 0 -5.775 -0.898 -1.553
45 H4 H H4 N N N 0 -6.6 -1.699 1.931
46 H5 H H5 N N N 0 -7.939 -0.671 1.366
47 H6 H H6 N N N 0 -8.645 -0.818 -0.985
48 H7 H H7 N N N 0 -7.801 -1.947 -2.071
49 H8 H H8 N N N 0 -8.834 -2.587 2.626
50 H9 H H9 N N N 0 -7.959 -3.718 1.565
51 H10 H H10 N N N 0 -8.667 -3.865 -0.792
52 H11 H H11 N N N 0 -10.019 -2.833 -1.32
53 H12 H H12 N N N 0 -3.732 0.501 -0.491
54 H13 H H13 N N N 0 -2.325 -1.515 1.085
55 H14 H H14 N N N 0 -2.751 1.321 2.133
56 H15 H H15 N N N 0 -3.46 -0.159 2.823
57 H16 H H16 N N N 0 -1.698 0.089 2.869
58 H17 H H17 N N N 0 0.073 -0.391 1.584
59 H19 H H19 N N N 0 1.28 2.222 1.391
60 H18 H H18 N N N 0 0.952 0.451 -1.071
61 H20 H H20 N N N 0 2.13 2.471 -0.153
62 H21 H H21 N N N 0 0.921 3.173 -2.138
63 H27 H H27 N N N 0 -1.112 2.587 1.565
64 H22 H H22 N N N 0 -1.036 4.369 -3.029
65 H26 H H26 N N N 0 -3.071 3.79 0.685
66 H23 H H23 N N N 0 -5.176 5.502 -1.36
67 H24 H H24 N N N 0 -4.747 3.971 -0.558
68 H25 H H25 N N N 0 -4.083 5.509 0.045
69 H28 H H28 N N N 0 3.587 0.921 -0.764
70 H29 H H29 N N N 0 4.53 -1.525 0.522
71 H30 H H30 N N N 0 5.978 0.656 -1.046
72 H31 H H31 N N N 0 6.738 -0.839 -0.448
73 H35 H H35 N N N 0 4.799 -1.301 -4.7
74 H32 H H32 N N N 0 4.322 -0.757 -2.309
75 H33 H H33 N N N 0 6.359 0.13 -3.409
76 H34 H H34 N N N 0 7.264 -1.316 -2.9
77 H36 H H36 N N N 0 6.478 -1.536 -5.241
78 H37 H H37 N N N 0 5.314 -3.71 -4.98
79 H38 H H38 N N N 0 6.653 -3.559 -3.817
80 H39 H H39 N N N 0 3.711 -3.0 -3.226
81 H40 H H40 N N N 0 4.615 -4.446 -2.717
82 H41 H H41 N N N 0 6.176 -3.015 -1.426
83 H42 H H42 N N N 0 4.497 -2.779 -0.884
84 H45 H H45 N N N 0 7.0 -1.107 1.744
85 H46 H H46 N N N 0 5.064 -2.235 2.807
86 H47 H H47 N N N 0 6.395 -2.019 3.969
87 H48 H H48 N N N 0 4.979 -0.941 4.026
88 H49 H H49 N N N 0 7.57 1.218 2.506
89 H50 H H50 N N N 0 6.501 0.983 3.909
90 H51 H H51 N N N 0 8.765 0.41 4.409