Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : 3N3

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 37


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 1.424 0.288 0.416
2 C2 C C2 S N N 0 2.813 0.711 0.615
3 C4 C C4 N N N 0 3.649 -0.57 0.465
4 C7 C C7 N Y N 0 2.636 -1.656 0.183
5 C8 C C8 N Y N 0 1.372 -1.087 0.169
6 C9 C C9 N Y N 0 0.265 -1.902 -0.074
7 C11 C C11 N Y N 0 0.431 -3.252 -0.296
8 C13 C C13 N Y N 0 1.696 -3.81 -0.281
9 C15 C C15 N Y N 0 2.797 -3.01 -0.04
10 C17 C C17 N N N 0 3.208 1.719 -0.433
11 O18 O O18 N N N 0 2.564 1.817 -1.451
12 O19 O O19 N N N 0 4.276 2.508 -0.236
13 C21 C C21 N N N 0 0.353 1.105 0.468
14 O22 O O22 N N N 0 0.502 2.29 0.69
15 O23 O O23 N N N 0 -0.883 0.607 0.274
16 C24 C C24 N N N 0 -1.99 1.544 0.345
17 C27 C C27 N Y N 0 -3.285 0.811 0.105
18 C28 C C28 N Y N 0 -3.775 0.677 -1.181
19 C30 C C30 N Y N 0 -4.963 0.005 -1.401
20 C32 C C32 N Y N 0 -5.66 -0.534 -0.335
21 C34 C C34 N Y N 0 -5.169 -0.401 0.95
22 C36 C C36 N Y N 0 -3.979 0.268 1.17
23 H2 H H2 N N N 0 2.941 1.132 1.612
24 H4 H H4 N N N 0 4.346 -0.474 -0.368
25 H4A H H4A N N N 0 4.188 -0.783 1.389
26 H9 H H9 N N N 0 -0.726 -1.473 -0.088
27 H11 H H11 N N N 0 -0.43 -3.877 -0.483
28 H13 H H13 N N N 0 1.824 -4.869 -0.455
29 H15 H H15 N N N 0 3.786 -3.444 -0.028
30 HO19 H HO19 N N N 0 4.49 3.14 -0.937
31 H24 H H24 N N N 0 -2.012 2.007 1.332
32 H24A H H24A N N N 0 -1.862 2.315 -0.415
33 H28 H H28 N N N 0 -3.231 1.098 -2.013
34 H30 H H30 N N N 0 -5.346 -0.099 -2.405
35 H32 H H32 N N N 0 -6.588 -1.058 -0.507
36 H34 H H34 N N N 0 -5.714 -0.821 1.782
37 H36 H H36 N N N 0 -3.594 0.368 2.174