Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 3XV

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 53


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C2 C C1 N Y N 0 -3.6 -2.473 1.036
2 C4 C C2 N Y N 0 -2.974 -0.369 0.335
3 C5 C C3 N Y N 0 -4.311 -0.051 0.123
4 C6 C C4 N Y N 0 -5.274 -1.029 0.393
5 CAT C C5 N N N 0 5.285 2.094 0.197
6 CAU C C6 N N N 0 6.561 1.464 0.757
7 CAV C C7 N Y N 0 6.828 0.148 0.073
8 CBB C C8 N Y N 0 8.096 -0.403 0.174
9 CBA C C9 N Y N 0 8.383 -1.609 -0.436
10 CAZ C C10 N Y N 0 7.4 -2.269 -1.149
11 CAY C C11 N Y N 0 6.137 -1.72 -1.25
12 CAW C C12 N Y N 0 5.849 -0.509 -0.64
13 CAX C C13 N N N 0 4.459 0.054 -0.787
14 NAS N N1 N N N 0 4.214 1.085 0.227
15 CAR C C14 N N N 0 2.898 1.709 0.035
16 CAB C C15 S N N 0 1.8 0.681 0.318
17 OAA O O1 N N N 0 1.844 0.306 1.696
18 CAC C C16 N N N 0 0.434 1.293 -0.001
19 NAD N N2 N N N 0 -0.617 0.309 0.27
20 CAE C C17 N N N 0 -1.909 0.628 0.06
21 OAF O O2 N N N 0 -2.203 1.731 -0.354
22 N3 N N3 N Y N 0 -2.663 -1.584 0.79
23 N1 N N4 N Y N 0 -4.878 -2.214 0.844
24 NAJ N N5 N N N 0 -6.619 -0.763 0.199
25 CAK C C18 N N N 0 -7.043 0.55 -0.293
26 CAL C C19 N N N 0 -8.484 0.926 0.1
27 H2 H H2 N N N 0 -4.597 0.923 -0.245
28 OAM O O3 N N N 0 -8.863 0.325 -1.155
29 CAN C C20 N N N 0 -7.563 0.533 -1.743
30 H1 H H1 N N N 0 -3.313 -3.448 1.403
31 H3 H H3 N N N 0 4.999 2.95 0.809
32 H4 H H4 N N N 0 5.456 2.416 -0.83
33 H5 H H5 N N N 0 7.401 2.138 0.589
34 H6 H H6 N N N 0 6.442 1.298 1.828
35 H7 H H7 N N N 0 8.864 0.113 0.731
36 H8 H H8 N N N 0 9.372 -2.034 -0.356
37 H9 H H9 N N N 0 7.62 -3.213 -1.626
38 H10 H H10 N N N 0 5.37 -2.238 -1.807
39 H11 H H11 N N N 0 4.351 0.492 -1.779
40 H12 H H12 N N N 0 3.731 -0.747 -0.664
41 H14 H H14 N N N 0 2.792 2.551 0.719
42 H15 H H15 N N N 0 2.809 2.062 -0.992
43 H16 H H16 N N N 0 1.958 -0.2 -0.304
44 H17 H H17 N N N 0 1.71 1.042 2.309
45 H18 H H18 N N N 0 0.276 2.174 0.621
46 H19 H H19 N N N 0 0.401 1.579 -1.052
47 H20 H H20 N N N 0 -0.382 -0.573 0.601
48 H21 H H21 N N N 0 -7.281 -1.447 0.389
49 H22 H H22 N N N 0 -6.314 1.335 -0.094
50 H23 H H23 N N N 0 -8.857 0.392 0.974
51 H24 H H24 N N N 0 -8.663 2.0 0.148
52 H25 H H25 N N N 0 -7.46 1.487 -2.26
53 H26 H H26 N N N 0 -7.204 -0.313 -2.33