Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 44H

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 31


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O3P O O3P N N N 0 -4.12 -1.279 -1.078
2 P P P N N N 0 -3.917 -0.106 0.007
3 O1P O O1P N N N 0 -4.973 1.076 -0.276
4 O2P O O2P N N N 0 -4.136 -0.648 1.366
5 O1 O O6 N N N 0 -2.419 0.474 -0.105
6 C1 C C6 N N N 0 -1.258 -0.304 0.195
7 C2 C C5 R N N 0 -0.005 0.549 -0.013
8 O2 O O5 N N N 0 0.004 1.621 0.931
9 C3 C C4 R N N 0 1.24 -0.318 0.186
10 O3 O O4 N N N 0 1.231 -1.39 -0.758
11 C4 C C3 R N N 0 2.493 0.535 -0.022
12 O4 O O3 N N N 0 2.435 1.161 -1.305
13 C5 C C2 R N N 0 3.735 -0.357 0.054
14 C6 C C1 N N N 0 4.988 0.496 -0.154
15 O6 O O1 N N N 0 6.138 -0.351 -0.199
16 O5 O O2 N N Y 0 3.793 -0.983 1.337
17 H1 H H1 N N N 0 -3.991 -0.994 -1.993
18 H2 H H2 N N N 0 -5.897 0.797 -0.226
19 H3 H H3 N N N 0 -1.303 -0.637 1.232
20 H4 H H4 N N N 0 -1.222 -1.171 -0.464
21 H5 H H5 N N N 0 -0.006 0.955 -1.025
22 H6 H H6 N N N 0 0.006 1.332 1.854
23 H7 H H7 N N N 0 1.241 -0.724 1.198
24 H8 H H8 N N N 0 1.229 -1.102 -1.681
25 H9 H H9 N N N 0 2.546 1.299 0.753
26 H10 H H10 N N N 0 2.386 0.54 -2.044
27 H11 H H11 N N N 0 3.682 -1.121 -0.721
28 H12 H H12 N N N 0 4.903 1.043 -1.093
29 H13 H H13 N N N 0 5.089 1.202 0.67
30 H14 H H14 N N N 0 6.971 0.123 -0.329
31 H15 H H15 N N N 0 3.842 -0.362 2.077