Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 44S

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 28


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O1P O O1P N N N 0 -3.399 1.629 -0.357
2 P P P N N N 0 -3.337 0.09 0.112
3 O3P O O3P N N N 0 -3.551 0.01 1.574
4 O2P O O2P N N N 0 -4.484 -0.748 -0.646
5 O6 O O6 N N N 0 -1.894 -0.524 -0.254
6 C6 C C6 N N N 0 -0.679 -0.064 0.343
7 C5 C C5 R N N 0 0.5 -0.857 -0.225
8 O5 O O5 N N N 0 0.634 -0.576 -1.62
9 C4 C C4 R N N 0 1.784 -0.453 0.503
10 C3 C C3 R N N 0 2.996 -1.154 -0.147
11 O3 O O3 N N N 0 3.404 -2.285 0.625
12 C2 C C2 N N N 0 4.079 -0.041 -0.111
13 O4 O O4 N N N 0 1.986 0.96 0.384
14 C1 C C1 R N N 0 3.208 1.223 -0.323
15 O1 O O1 N N Y 0 3.859 2.372 0.223
16 H1A H H1 N N N 0 -3.267 1.757 -1.306
17 H2A H H2 N N N 0 -5.381 -0.434 -0.472
18 H61 H H3 N N N 0 -0.544 0.995 0.124
19 H62 H H4 N N N 0 -0.728 -0.209 1.423
20 H5 H H5 N N N 0 0.322 -1.923 -0.084
21 HO5 H H6 N N Y 0 0.794 0.356 -1.82
22 H4 H H7 N N N 0 1.716 -0.731 1.554
23 H3 H H8 N N N 0 2.771 -1.447 -1.173
24 HO3 H H9 N N Y 0 4.163 -2.759 0.258
25 H2 H H10 N N N 0 4.582 -0.013 0.856
26 H11 H H11 N N N 0 4.797 -0.164 -0.921
27 H1 H H12 N N N 0 3.007 1.37 -1.385
28 HO1 H H13 N N Y 0 3.341 3.186 0.157