Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 4OY

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 46


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 -5.543 0.139 -1.789
2 C5 C C2 N Y N 0 -7.43 -0.443 -0.445
3 C4 C C3 N Y N 0 -6.623 -0.447 0.674
4 C3 C C4 N Y N 0 -5.267 -0.165 0.567
5 C2 C C5 N Y N 0 -4.729 0.137 -0.664
6 C6 C C6 N Y N 0 -6.888 -0.15 -1.682
7 C7 C C7 N N N 0 -3.274 0.479 -0.851
8 C8 C C8 S N N 0 -2.455 0.015 0.352
9 O1 O O1 N N N 0 0.13 -2.332 1.281
10 O3 O O2 N N N 0 3.498 1.898 -0.068
11 C16 C C9 N N N 0 3.636 0.691 -0.056
12 C17 C C10 N Y N 0 4.988 0.1 -0.134
13 C18 C C11 N Y N 0 5.15 -1.286 -0.127
14 C19 C C12 N Y N 0 6.415 -1.831 -0.2
15 C20 C C13 N Y N 0 7.523 -1.006 -0.281
16 C21 C C14 N Y N 0 7.37 0.37 -0.289
17 C22 C C15 N Y N 0 6.11 0.927 -0.222
18 N1 N N1 N N N 0 2.555 -0.11 0.028
19 C13 C C16 N Y N 0 1.287 0.443 0.101
20 C14 C C17 N Y N 0 0.124 -0.28 0.19
21 C15 C C18 N N N 0 0.079 -1.743 0.218
22 O2 O O3 N N N 0 -0.018 -2.437 -0.934
23 C11 C C19 N Y N 0 -1.053 0.559 0.252
24 C12 C C20 N Y N 0 -0.774 1.854 0.211
25 S1 S S1 N Y N 0 0.958 2.115 0.101
26 C9 C C21 N N N 0 -3.124 0.545 1.626
27 C10 C C22 N N N 0 -4.441 -0.203 1.826
28 H1 H H1 N N N 0 -5.121 0.372 -2.756
29 H2 H H2 N N N 0 -8.483 -0.668 -0.355
30 H3 H H3 N N N 0 -7.048 -0.676 1.64
31 H4 H H4 N N N 0 -7.515 -0.147 -2.562
32 H5 H H5 N N N 0 -2.901 -0.011 -1.75
33 H6 H H6 N N N 0 -3.17 1.559 -0.961
34 H7 H H7 N N N 0 -2.425 -1.074 0.378
35 H8 H H8 N N N 0 4.286 -1.931 -0.064
36 H9 H H9 N N N 0 6.541 -2.903 -0.194
37 H10 H H10 N N N 0 8.511 -1.437 -0.337
38 H11 H H11 N N N 0 8.239 1.008 -0.352
39 H12 H H12 N N N 0 5.992 2.0 -0.233
40 H13 H H13 N N N 0 2.665 -1.074 0.037
41 H14 H H14 N N N 0 -0.044 -3.401 -0.865
42 H15 H H15 N N N 0 -1.512 2.641 0.245
43 H16 H H16 N N N 0 -2.471 0.373 2.482
44 H17 H H17 N N N 0 -3.319 1.612 1.522
45 H18 H H18 N N N 0 -5.0 0.265 2.636
46 H19 H H19 N N N 0 -4.23 -1.24 2.086