Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 4VJ

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 62


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O2 O O1 N N N 0 -3.001 1.388 1.407
2 C11 C C1 N Y N 0 1.165 0.401 0.594
3 C12 C C2 N Y N 0 0.711 -0.502 -0.346
4 C13 C C3 N Y N 0 2.57 0.82 0.803
5 C14 C C4 N Y N 0 2.894 1.744 1.802
6 C15 C C5 N Y N 0 4.219 2.105 1.96
7 C16 C C6 N Y N 0 4.801 0.696 0.23
8 C17 C C7 N N N 0 -1.53 -1.461 -0.995
9 C18 C C8 N N N 0 -2.037 -2.618 -0.125
10 C19 C C9 N N N 0 -2.384 -2.101 1.27
11 C20 C C10 S N N 0 -4.595 -0.867 1.322
12 C21 C C11 N Y N 0 -5.161 -0.34 0.029
13 C22 C C12 N Y N 0 -6.13 0.646 0.049
14 C23 C C13 N Y N 0 -6.649 1.13 -1.138
15 C24 C C14 N Y N 0 -6.198 0.626 -2.346
16 C25 C C15 N Y N 0 -5.23 -0.359 -2.365
17 C26 C C16 N Y N 0 -4.707 -0.838 -1.178
18 C27 C C17 N N N 0 -5.083 -2.3 1.546
19 C28 C C18 S N N 0 7.186 0.56 -0.386
20 C29 C C19 N N N 0 7.982 0.327 -1.687
21 C30 C C20 R N N 0 9.373 -0.151 -1.202
22 CL1 CL CL1 N N N 0 -7.866 2.367 -1.113
23 N3 N N1 N Y N 0 5.136 1.569 1.168
24 N5 N N2 N N N 0 -3.132 -0.854 1.257
25 C31 C C21 N N N 0 9.022 -1.045 0.014
26 C8 C C22 N Y N 0 -1.039 0.223 0.796
27 O34 O O2 N N N 0 10.03 -0.912 -2.217
28 C32 C C23 N N N 0 7.848 -0.312 0.695
29 C10 C C24 N Y N 0 0.038 0.855 1.316
30 C9 C C25 N N N 0 -2.46 0.321 1.183
31 N1 N N3 N Y N 0 -0.621 -0.616 -0.219
32 N7 N N4 N N N 0 5.791 0.155 -0.572
33 O6 O O3 N N N 0 -4.748 -3.1 0.41
34 N4 N N5 N Y N 0 3.545 0.319 0.048
35 H1 H H1 N N N 0 1.324 -1.028 -1.063
36 H2 H H2 N N N 0 2.127 2.167 2.434
37 H3 H H3 N N N 0 4.504 2.816 2.721
38 H4 H H4 N N N 0 -1.002 -1.862 -1.86
39 H5 H H5 N N N 0 -2.377 -0.864 -1.335
40 H6 H H6 N N N 0 -2.927 -3.052 -0.582
41 H7 H H7 N N N 0 -1.262 -3.379 -0.047
42 H8 H H8 N N N 0 -2.976 -2.858 1.786
43 H9 H H9 N N N 0 -1.458 -1.945 1.825
44 H10 H H10 N N N 0 -4.928 -0.238 2.148
45 H11 H H11 N N N 0 -6.482 1.038 0.992
46 H12 H H12 N N N 0 -6.606 1.0 -3.273
47 H13 H H13 N N N 0 -4.878 -0.752 -3.307
48 H14 H H14 N N N 0 -3.95 -1.608 -1.193
49 H15 H H15 N N N 0 -4.604 -2.713 2.434
50 H16 H H16 N N N 0 -6.164 -2.299 1.683
51 H17 H H17 N N N 0 7.236 1.61 -0.101
52 H18 H H18 N N N 0 7.504 -0.443 -2.294
53 H19 H H19 N N N 0 8.073 1.256 -2.25
54 H20 H H20 N N N 0 9.988 0.696 -0.898
55 H21 H H21 N N N 0 8.713 -2.036 -0.318
56 H22 H H22 N N N 0 9.873 -1.118 0.691
57 H23 H H23 N N N 0 10.905 -1.235 -1.963
58 H24 H H24 N N N 0 8.219 0.315 1.505
59 H25 H H25 N N N 0 7.13 -1.036 1.082
60 H26 H H26 N N N 0 0.037 1.569 2.127
61 H27 H H27 N N N 0 5.56 -0.491 -1.258
62 H28 H H28 N N N 0 -5.027 -4.023 0.482