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PDBeChem : Atoms of Molecule
Molecule : 50D
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 58
Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
1 |
C4 |
C |
C1 |
N |
Y |
N |
0 |
-2.402 |
-2.248 |
0.076 |
2 |
C14 |
C |
C2 |
N |
Y |
N |
0 |
-0.859 |
1.502 |
-0.254 |
3 |
C5 |
C |
C3 |
N |
Y |
N |
0 |
-2.909 |
-3.542 |
0.121 |
4 |
C6 |
C |
C4 |
N |
Y |
N |
0 |
-4.288 |
-3.73 |
0.01 |
5 |
C11 |
C |
C5 |
N |
Y |
N |
0 |
0.874 |
-0.583 |
0.045 |
6 |
C7 |
C |
C6 |
N |
N |
N |
0 |
-4.856 |
-5.044 |
0.05 |
7 |
C10 |
C |
C7 |
N |
Y |
N |
0 |
-0.503 |
-0.764 |
0.04 |
8 |
C12 |
C |
C8 |
N |
Y |
N |
0 |
1.39 |
0.694 |
-0.107 |
9 |
C13 |
C |
C9 |
N |
Y |
N |
0 |
0.508 |
1.752 |
-0.259 |
10 |
N3 |
N |
N1 |
N |
Y |
N |
0 |
-3.21 |
-1.209 |
-0.069 |
11 |
C1 |
C |
C10 |
N |
Y |
N |
0 |
-5.102 |
-2.599 |
-0.142 |
12 |
C2 |
C |
C11 |
N |
Y |
N |
0 |
-4.517 |
-1.351 |
-0.177 |
13 |
N8 |
N |
N2 |
N |
N |
N |
0 |
-5.307 |
-6.087 |
0.083 |
14 |
N9 |
N |
N3 |
N |
N |
N |
0 |
-1.03 |
-2.043 |
0.192 |
15 |
N15 |
N |
N4 |
N |
Y |
N |
0 |
-1.321 |
0.269 |
-0.107 |
16 |
N16 |
N |
N5 |
N |
N |
N |
0 |
-1.752 |
2.557 |
-0.399 |
17 |
C17 |
C |
C12 |
N |
N |
N |
0 |
-1.656 |
3.497 |
0.747 |
18 |
C18 |
C |
C13 |
N |
N |
N |
0 |
-2.999 |
4.26 |
0.738 |
19 |
C19 |
C |
C14 |
N |
N |
N |
0 |
-3.986 |
3.325 |
0.009 |
20 |
C20 |
C |
C15 |
N |
N |
N |
0 |
-3.157 |
2.076 |
-0.361 |
21 |
F21 |
F |
F1 |
N |
N |
N |
0 |
-5.04 |
2.973 |
0.859 |
22 |
F22 |
F |
F2 |
N |
N |
N |
0 |
-4.478 |
3.943 |
-1.145 |
23 |
C23 |
C |
C16 |
N |
N |
N |
0 |
2.879 |
0.928 |
-0.106 |
24 |
C24 |
C |
C17 |
N |
N |
N |
0 |
3.471 |
0.45 |
1.223 |
25 |
C25 |
C |
C18 |
N |
N |
N |
0 |
4.99 |
0.634 |
1.194 |
26 |
N26 |
N |
N6 |
N |
N |
N |
0 |
5.556 |
-0.137 |
0.08 |
27 |
C27 |
C |
C19 |
N |
N |
N |
0 |
5.038 |
0.335 |
-1.21 |
28 |
C28 |
C |
C20 |
N |
N |
N |
0 |
3.521 |
0.143 |
-1.253 |
29 |
C29 |
C |
C21 |
N |
N |
N |
0 |
7.025 |
-0.096 |
0.105 |
30 |
C30 |
C |
C22 |
N |
N |
N |
0 |
7.66 |
-1.14 |
1.043 |
31 |
O31 |
O |
O1 |
N |
N |
N |
0 |
8.598 |
-1.366 |
-0.029 |
32 |
C32 |
C |
C23 |
N |
N |
N |
0 |
7.688 |
-0.887 |
-1.039 |
33 |
H1 |
H |
H1 |
N |
N |
N |
0 |
-2.247 |
-4.387 |
0.239 |
34 |
H2 |
H |
H2 |
N |
N |
N |
0 |
1.536 |
-1.428 |
0.166 |
35 |
H3 |
H |
H3 |
N |
N |
N |
0 |
0.879 |
2.759 |
-0.379 |
36 |
H4 |
H |
H4 |
N |
N |
N |
0 |
-6.173 |
-2.704 |
-0.232 |
37 |
H5 |
H |
H5 |
N |
N |
N |
0 |
-5.139 |
-0.476 |
-0.293 |
38 |
H6 |
H |
H6 |
N |
N |
N |
0 |
-0.442 |
-2.791 |
0.378 |
39 |
H7 |
H |
H7 |
N |
N |
N |
0 |
-1.538 |
2.947 |
1.681 |
40 |
H8 |
H |
H8 |
N |
N |
N |
0 |
-0.824 |
4.187 |
0.605 |
41 |
H9 |
H |
H9 |
N |
N |
N |
0 |
-3.336 |
4.445 |
1.758 |
42 |
H10 |
H |
H10 |
N |
N |
N |
0 |
-2.897 |
5.199 |
0.196 |
43 |
H11 |
H |
H11 |
N |
N |
N |
0 |
-3.456 |
1.697 |
-1.338 |
44 |
H12 |
H |
H12 |
N |
N |
N |
0 |
-3.273 |
1.303 |
0.4 |
45 |
H13 |
H |
H13 |
N |
N |
N |
0 |
3.081 |
1.991 |
-0.234 |
46 |
H14 |
H |
H14 |
N |
N |
N |
0 |
3.049 |
1.035 |
2.04 |
47 |
H15 |
H |
H15 |
N |
N |
N |
0 |
3.234 |
-0.603 |
1.369 |
48 |
H19 |
H |
H19 |
N |
N |
N |
0 |
5.274 |
1.393 |
-1.331 |
49 |
H16 |
H |
H16 |
N |
N |
N |
0 |
5.226 |
1.69 |
1.062 |
50 |
H17 |
H |
H17 |
N |
N |
N |
0 |
5.416 |
0.282 |
2.134 |
51 |
H23 |
H |
H23 |
N |
N |
N |
0 |
7.421 |
0.911 |
0.231 |
52 |
H20 |
H |
H20 |
N |
N |
N |
0 |
5.499 |
-0.234 |
-2.017 |
53 |
H21 |
H |
H21 |
N |
N |
N |
0 |
3.285 |
-0.916 |
-1.146 |
54 |
H22 |
H |
H22 |
N |
N |
N |
0 |
3.134 |
0.508 |
-2.205 |
55 |
H24 |
H |
H24 |
N |
N |
N |
0 |
8.109 |
-0.711 |
1.939 |
56 |
H25 |
H |
H25 |
N |
N |
N |
0 |
7.017 |
-1.994 |
1.253 |
57 |
H26 |
H |
H26 |
N |
N |
N |
0 |
7.053 |
-1.663 |
-1.465 |
58 |
H27 |
H |
H27 |
N |
N |
N |
0 |
8.159 |
-0.257 |
-1.795 |
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