Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 59M

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 41


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C4 C C1 N Y N 0 -2.21 -1.615 -1.394
2 C5 C C2 N Y N 0 -1.821 -1.45 -0.062
3 C6 C C3 N Y N 0 -0.635 -2.102 0.361
4 N1 N N1 N Y N 0 0.043 -2.83 -0.513
5 N3 N N2 N Y N 0 -1.457 -2.371 -2.203
6 FAB F F1 N N N 0 -4.244 2.48 -1.038
7 CBA C C4 N N N 0 -4.426 2.216 0.324
8 FAC F F2 N N N 0 -3.23 2.455 1.009
9 FAD F F3 N N N 0 -5.428 3.05 0.83
10 CAL C C5 N N N 0 -4.837 0.754 0.509
11 CAS C C6 N Y N 0 -3.757 -0.145 -0.036
12 SAR S S1 N Y N 0 -3.691 -0.718 -1.692
13 CAF C C7 N Y N 0 -2.744 -0.604 0.672
14 C2 C C8 N Y N 0 -0.366 -2.955 -1.763
15 NAZ N N3 N N N 0 -0.193 -1.98 1.667
16 CAK C C9 N N N 0 1.048 -2.738 1.875
17 CAI C C10 N N N 0 2.163 -2.131 1.02
18 CAJ C C11 N N N 0 -0.013 -0.568 2.032
19 CAH C C12 N N N 0 1.101 0.039 1.177
20 NAY N N4 N N N 0 2.343 -0.719 1.386
21 CAU C C13 N Y N 0 3.395 -0.153 0.68
22 SAQ S S2 N Y N 0 3.957 1.515 0.808
23 NAP N N5 N Y N 0 4.149 -0.758 -0.191
24 NAO N N6 N Y N 0 5.065 -0.086 -0.74
25 CAT C C14 N Y N 0 5.193 1.155 -0.399
26 CAG C C15 N N N 0 6.219 2.12 -0.933
27 FAA F F4 N N N 0 5.704 2.773 -2.058
28 H1 H H1 N N N 0 -4.979 0.548 1.57
29 H2 H H2 N N N 0 -5.768 0.568 -0.025
30 H3 H H3 N N N 0 -2.608 -0.364 1.716
31 H4 H H4 N N N 0 0.215 -3.557 -2.445
32 H5 H H5 N N N 0 1.33 -2.691 2.927
33 H6 H H6 N N N 0 0.893 -3.777 1.586
34 H7 H H7 N N N 0 3.092 -2.673 1.196
35 H8 H H8 N N N 0 1.893 -2.202 -0.033
36 H9 H H9 N N N 0 -0.943 -0.026 1.857
37 H10 H H10 N N N 0 0.257 -0.497 3.086
38 H11 H H11 N N N 0 0.819 -0.008 0.125
39 H12 H H12 N N N 0 1.256 1.078 1.466
40 H17 H H17 N N N 0 6.462 2.855 -0.166
41 H18 H H18 N N N 0 7.121 1.574 -1.212