Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 5NO

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 51


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C10 C C1 N Y N 0 3.325 -2.181 1.582
2 C15 C C2 N Y N 0 -0.682 0.944 -0.789
3 C17 C C3 N Y N 0 -1.392 2.891 -0.133
4 C20 C C4 N Y N 0 -3.42 3.653 1.593
5 C21 C C5 N Y N 0 -3.2 2.312 1.363
6 C22 C C6 N Y N 0 -2.186 1.919 0.5
7 C24 C C7 N N N 0 -2.227 -0.619 0.448
8 C26 C C8 N N N 0 -3.777 -2.472 -0.193
9 C01 C C9 N N N 0 5.144 1.655 -0.488
10 C02 C C10 N N N 0 5.7 0.348 -1.057
11 C03 C C11 N N N 0 4.787 0.321 0.171
12 N04 N N1 N N N 0 3.422 -0.18 -0.011
13 C05 C C12 N Y N 0 2.866 -1.27 0.638
14 C06 C C13 N Y N 0 1.552 -1.396 0.171
15 C07 C C14 N Y N 0 0.759 -2.418 0.662
16 N08 N N2 N Y N 0 1.236 -3.261 1.559
17 C09 C C15 N Y N 0 2.47 -3.172 2.02
18 N11 N N3 N N N 0 1.356 -0.373 -0.751
19 C12 C C16 N N N 0 2.496 0.341 -0.839
20 O13 O O1 N N N 0 2.663 1.309 -1.557
21 C14 C C17 N N N 0 0.123 -0.115 -1.498
22 N16 N N4 N Y N 0 -0.495 2.226 -0.906
23 C18 C C18 N Y N 0 -1.635 4.245 0.113
24 C19 C C19 N Y N 0 -2.637 4.612 0.966
25 N23 N N5 N Y N 0 -1.714 0.698 0.063
26 C25 C C20 N N N 0 -3.241 -1.096 -0.595
27 C27 C C21 N N N 0 -4.79 -2.949 -1.235
28 O28 O O2 N N N 0 -5.291 -4.234 -0.859
29 H1 H H1 N N N 0 4.334 -2.117 1.962
30 H2 H H2 N N N 0 -4.208 3.96 2.265
31 H3 H H3 N N N 0 -3.812 1.569 1.853
32 H4 H H4 N N N 0 -1.402 -1.329 0.503
33 H5 H H5 N N N 0 -2.713 -0.55 1.421
34 H6 H H6 N N N 0 -2.951 -3.181 -0.137
35 H7 H H7 N N N 0 -4.262 -2.402 0.781
36 H8 H H8 N N N 0 5.837 2.308 0.042
37 H9 H H9 N N N 0 4.363 2.16 -1.056
38 H10 H H10 N N N 0 5.285 -0.006 -2.001
39 H11 H H11 N N N 0 6.759 0.142 -0.902
40 H12 H H12 N N N 0 5.246 0.096 1.134
41 H13 H H13 N N N 0 -0.256 -2.527 0.31
42 H14 H H14 N N N 0 2.818 -3.889 2.75
43 H15 H H15 N N N 0 -0.461 -1.033 -1.563
44 H16 H H16 N N N 0 0.371 0.229 -2.502
45 H17 H H17 N N N 0 -1.031 4.999 -0.369
46 H18 H H18 N N N 0 -2.82 5.659 1.156
47 H19 H H19 N N N 0 -4.066 -0.387 -0.65
48 H20 H H20 N N N 0 -2.755 -1.166 -1.568
49 H21 H H21 N N N 0 -5.616 -2.239 -1.29
50 H22 H H22 N N N 0 -4.305 -3.018 -2.208
51 H23 H H23 N N N 0 -5.94 -4.598 -1.477