Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : 5SK

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 36


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 CAA C C1 N N N 0 4.474 -0.372 1.732
2 CAH C C2 N N N 0 4.613 0.037 0.264
3 CAR C C3 R N N 0 3.277 0.586 -0.241
4 CAC C C4 N N N 0 3.448 1.11 -1.669
5 NAL N N1 N N N 0 2.274 -0.482 -0.23
6 CAN C C5 N Y N 0 0.932 -0.169 -0.134
7 NAK N N2 N Y N 0 0.554 1.087 -0.053
8 CAO C C6 N Y N 0 -0.758 1.425 0.041
9 CAF C C7 N Y N 0 -1.126 2.774 0.126
10 CAD C C8 N Y N 0 -2.454 3.119 0.222
11 CAE C C9 N Y N 0 -3.435 2.138 0.237
12 CAG C C10 N Y N 0 -3.091 0.806 0.154
13 CAP C C11 N Y N 0 -1.756 0.436 0.056
14 NAS N N3 N Y N 0 -1.4 -0.9 -0.027
15 CAQ C C12 N Y N 0 -0.072 -1.235 -0.129
16 NAJ N N4 N Y N 0 -0.014 -2.548 -0.199
17 NAI N N5 N Y N 0 -1.207 -3.031 -0.153
18 CAM C C13 N Y N 0 -2.082 -2.061 -0.04
19 CAB C C14 N N N 0 -3.578 -2.217 0.045
20 H1 H H1 N N N 0 4.19 0.496 2.326
21 H2 H H2 N N N 0 3.707 -1.141 1.823
22 H3 H H3 N N N 0 5.425 -0.764 2.091
23 H4 H H4 N N N 0 5.38 0.806 0.172
24 H5 H H5 N N N 0 4.896 -0.832 -0.33
25 H6 H H6 N N N 0 2.95 1.398 0.407
26 H7 H H7 N N N 0 3.775 0.297 -2.317
27 H8 H H8 N N N 0 2.496 1.501 -2.029
28 H9 H H9 N N N 0 4.194 1.904 -1.677
29 H10 H H10 N N N 0 2.553 -1.409 -0.29
30 H11 H H11 N N N 0 -0.368 3.543 0.116
31 H12 H H12 N N N 0 -2.735 4.16 0.288
32 H13 H H13 N N N 0 -4.475 2.421 0.314
33 H14 H H14 N N N 0 -3.861 0.048 0.166
34 H15 H H15 N N N 0 -3.887 -2.197 1.091
35 H16 H H16 N N N 0 -4.06 -1.4 -0.491
36 H17 H H17 N N N 0 -3.871 -3.168 -0.401