Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 5TG

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 70


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N N N1 N N N 0 7.511 1.084 -0.007
2 C C C1 N N N 0 8.962 1.155 -0.234
3 O2 O O2 N N N 0 7.286 -1.106 -0.277
4 C4 C C2 N N N 0 6.764 -0.037 -0.042
5 C3 C C3 N N N 0 7.009 2.443 0.272
6 C2 C C4 N N N 0 8.24 3.218 0.805
7 C1 C C5 N N N 0 9.38 2.631 -0.066
8 C5 C C6 N N N 0 5.28 0.038 0.21
9 C6 C C7 N N N 0 4.675 -1.364 0.112
10 C7 C C8 N N N 0 3.168 -1.288 0.368
11 C11 C C9 N N N 0 2.582 -2.702 0.394
12 C10 C C10 N N N 0 1.066 -2.617 0.59
13 N1 N N2 N N N 0 0.473 -1.842 -0.507
14 C9 C C11 N N N 0 0.986 -0.466 -0.522
15 C8 C C12 N N N 0 2.499 -0.486 -0.751
16 C12 C C13 N Y N 0 -0.922 -1.855 -0.431
17 C17 C C14 N Y N 0 -1.557 -2.541 0.596
18 C16 C C15 N Y N 0 -2.936 -2.552 0.668
19 C15 C C16 N Y N 0 -3.685 -1.881 -0.282
20 C14 C C17 N Y N 0 -3.056 -1.197 -1.306
21 C13 C C18 N Y N 0 -1.677 -1.177 -1.38
22 C18 C C19 N N N 0 -5.19 -1.896 -0.201
23 H1 H H1 N N N 0 9.482 0.537 0.498
24 H2 H H2 N N N 0 9.197 0.813 -1.241
25 H3 H H3 N N N 0 6.637 2.903 -0.643
26 H4 H H4 N N N 0 6.225 2.411 1.028
27 H5 H H5 N N N 0 8.13 4.289 0.635
28 H6 H H6 N N N 0 8.408 3.006 1.86
29 H7 H H7 N N N 0 10.337 2.704 0.451
30 H8 H H8 N N N 0 9.425 3.132 -1.033
31 H9 H H9 N N N 0 5.101 0.442 1.206
32 H10 H H10 N N N 0 4.817 0.686 -0.534
33 H11 H H11 N N N 0 4.854 -1.768 -0.884
34 H12 H H12 N N N 0 5.138 -2.012 0.856
35 H13 H H13 N N N 0 2.986 -0.8 1.326
36 H14 H H14 N N N 0 2.799 -3.204 -0.549
37 H15 H H15 N N N 0 3.024 -3.265 1.216
38 H16 H H16 N N N 0 0.644 -3.622 0.595
39 H17 H H17 N N N 0 0.85 -2.128 1.54
40 H18 H H18 N N N 0 0.504 0.092 -1.326
41 H19 H H19 N N N 0 0.769 0.014 0.433
42 H20 H H20 N N N 0 2.881 0.534 -0.747
43 H21 H H21 N N N 0 2.715 -0.953 -1.712
44 H22 H H22 N N N 0 -0.973 -3.066 1.338
45 H23 H H23 N N N 0 -3.431 -3.086 1.466
46 H24 H H24 N N N 0 -3.644 -0.674 -2.046
47 H25 H H25 N N N 0 -1.186 -0.639 -2.177
48 H26 H H26 N N N 0 -5.608 -1.82 -1.204
49 H27 H H27 N N N 0 -5.519 -2.827 0.261
50 N2 N N3 N N N 0 -5.646 -0.762 0.606
51 C20 C C20 N N N 0 -5.915 0.42 0.017
52 C19 C C21 N N N 0 -5.812 -0.912 2.054
53 O3 O O3 N N N 0 -6.335 1.462 0.758
54 C22 C C22 N N N 0 -6.605 2.704 0.056
55 O1 O O1 N N N 0 -5.778 0.545 -1.184
56 C21 C C23 N N N 0 -7.701 2.473 -0.986
57 C23 C C24 N N N 0 -7.068 3.765 1.057
58 C24 C C25 N N N 0 -5.33 3.183 -0.642
59 H28 H H28 N N N 0 -4.877 -0.658 2.555
60 H29 H H29 N N N 0 -6.603 -0.247 2.401
61 H30 H H30 N N N 0 -6.077 -1.944 2.284
62 H31 H H31 N N N 0 -8.609 2.132 -0.489
63 H32 H H32 N N N 0 -7.904 3.405 -1.513
64 H33 H H33 N N N 0 -7.371 1.717 -1.699
65 H34 H H34 N N N 0 -6.287 3.93 1.799
66 H35 H H35 N N N 0 -7.271 4.698 0.53
67 H36 H H36 N N N 0 -7.976 3.424 1.554
68 H37 H H37 N N N 0 -5.001 2.427 -1.355
69 H38 H H38 N N N 0 -5.533 4.115 -1.169
70 H39 H H39 N N N 0 -4.549 3.348 0.101