Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 5V4

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 21


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O01 O O1 N N N 0 3.076 0.665 0.377
2 O O O2 N N N 0 1.417 -1.979 -0.478
3 C01 C C1 R N N 0 1.854 0.417 -0.32
4 C02 C C2 R N N 0 1.12 -0.803 0.277
5 C03 C C3 N N N 0 0.845 1.56 -0.081
6 C04 C C4 N Y N 0 -0.353 -0.47 0.172
7 C05 C C5 N Y N 0 -0.511 0.888 -0.034
8 C06 C C6 N Y N 0 -1.466 -1.289 0.251
9 C07 C C7 N Y N 0 -1.782 1.423 -0.161
10 C08 C C8 N Y N 0 -2.734 -0.754 0.124
11 C C C9 N Y N 0 -2.892 0.604 -0.083
12 H1 H H1 N N N 0 3.575 1.421 0.039
13 H2 H H2 N N N 0 0.983 -2.778 -0.149
14 H3 H H3 N N N 0 2.038 0.275 -1.385
15 H4 H H4 N N N 0 1.403 -0.941 1.321
16 H5 H H5 N N N 0 1.054 2.057 0.866
17 H6 H H6 N N N 0 0.883 2.276 -0.902
18 H7 H H7 N N N 0 -1.344 -2.35 0.412
19 H8 H H8 N N N 0 -1.906 2.484 -0.322
20 H9 H H9 N N N 0 -3.6 -1.395 0.186
21 H10 H H10 N N N 0 -3.882 1.024 -0.182