Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 5W0

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 71


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C10 C C1 N Y N 0 -3.328 0.298 -0.529
2 N12 N N1 N N N 0 -1.274 0.059 0.721
3 C13 C C2 N Y N 0 -0.73 1.245 0.256
4 C15 C C3 N Y N 0 -1.053 3.33 -0.672
5 C17 C C4 N N N 0 0.896 4.839 -1.155
6 C20 C C5 N Y N 0 3.316 1.749 0.517
7 C21 C C6 N Y N 0 2.849 1.049 1.623
8 C22 C C7 N Y N 0 3.645 0.096 2.227
9 C24 C C8 N Y N 0 5.384 0.531 0.629
10 C01 C C9 N N N 0 -10.711 -0.966 -1.263
11 N02 N N2 N N N 0 -9.271 -0.713 -1.116
12 C03 C C10 N N N 0 -8.51 -1.97 -1.144
13 C04 C C11 N N N 0 -7.014 -1.658 -1.068
14 N05 N N3 N N N 0 -6.735 -0.904 0.162
15 C06 C C12 N N N 0 -7.496 0.352 0.19
16 C07 C C13 N N N 0 -8.993 0.041 0.114
17 C08 C C14 N Y N 0 -5.362 -0.663 0.303
18 C09 C C15 N Y N 0 -4.681 0.06 -0.668
19 C11 C C16 N Y N 0 -2.647 -0.184 0.581
20 N14 N N4 N Y N 0 -1.536 2.183 -0.218
21 C16 C C17 N Y N 0 0.311 3.546 -0.648
22 C18 C C18 N Y N 0 1.135 2.541 -0.138
23 N19 N N5 N N N 0 2.51 2.713 -0.094
24 C23 C C19 N Y N 0 4.909 -0.165 1.735
25 N25 N N6 N N N 0 6.662 0.266 0.132
26 S26 S S1 N N N 0 7.171 -1.299 -0.052
27 O27 O O1 N N N 0 8.499 -1.179 -0.544
28 O28 O O2 N N N 0 6.908 -1.903 1.207
29 C29 C C20 N N N 0 6.079 -1.984 -1.327
30 C30 C C21 N N N 0 6.234 -1.177 -2.618
31 C31 C C22 N N N 0 6.454 -3.443 -1.59
32 C32 C C23 N N N 0 4.627 -1.908 -0.85
33 C33 C C24 N Y N 0 4.588 1.492 0.023
34 N34 N N7 N Y N 0 0.583 1.414 0.301
35 C35 C C25 N Y N 0 -3.326 -0.908 1.552
36 C36 C C26 N Y N 0 -4.681 -1.147 1.414
37 F37 F F1 N N N 0 -5.343 -1.85 2.359
38 H101 H H1 N N N 0 -2.798 0.857 -1.286
39 H121 H H2 N N N 0 -0.705 -0.603 1.143
40 H151 H H3 N N N 0 -1.719 4.089 -1.057
41 H171 H H4 N N N 0 0.956 5.556 -0.336
42 H172 H H5 N N N 0 1.894 4.655 -1.551
43 H173 H H6 N N N 0 0.26 5.241 -1.944
44 H211 H H7 N N N 0 1.861 1.252 2.011
45 H221 H H8 N N N 0 3.279 -0.446 3.087
46 H011 H H9 N N N 0 -11.054 -1.601 -0.446
47 H012 H H10 N N N 0 -11.251 -0.019 -1.239
48 H013 H H11 N N N 0 -10.897 -1.466 -2.214
49 H031 H H13 N N N 0 -8.797 -2.588 -0.293
50 H032 H H14 N N N 0 -8.724 -2.504 -2.07
51 H041 H H15 N N N 0 -6.448 -2.59 -1.06
52 H042 H H16 N N N 0 -6.722 -1.063 -1.934
53 H061 H H17 N N N 0 -7.282 0.886 1.116
54 H062 H H18 N N N 0 -7.209 0.97 -0.661
55 H071 H H19 N N N 0 -9.558 0.973 0.106
56 H072 H H20 N N N 0 -9.285 -0.554 0.979
57 H091 H H21 N N N 0 -5.21 0.435 -1.531
58 H191 H H22 N N N 0 2.912 3.504 -0.486
59 H231 H H23 N N N 0 5.53 -0.911 2.21
60 H251 H H24 N N N 0 7.251 0.999 -0.105
61 H301 H H27 N N N 0 7.268 -1.231 -2.958
62 H302 H H28 N N N 0 5.577 -1.588 -3.385
63 H303 H H29 N N N 0 5.966 -0.137 -2.431
64 H311 H H30 N N N 0 6.343 -4.018 -0.67
65 H312 H H31 N N N 0 5.797 -3.855 -2.357
66 H313 H H32 N N N 0 7.488 -3.497 -1.93
67 H321 H H33 N N N 0 4.36 -0.868 -0.663
68 H322 H H34 N N N 0 3.97 -2.319 -1.616
69 H323 H H35 N N N 0 4.517 -2.482 0.07
70 H331 H H36 N N N 0 4.954 2.034 -0.837
71 H351 H H37 N N N 0 -2.796 -1.283 2.415