Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 5ZF

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 61


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C10 C C1 N Y N 0 -7.04 -3.491 0.363
2 C13 C C2 N Y N 0 -6.778 -0.744 0.091
3 C15 C C3 N Y N 0 -2.9 1.001 -0.153
4 C17 C C4 N Y N 0 1.268 0.979 1.469
5 C20 C C5 N Y N 0 2.333 2.651 3.331
6 C21 C C6 N Y N 0 2.802 1.353 3.253
7 C22 C C7 N Y N 0 2.263 0.496 2.306
8 C26 C C8 N N N 0 4.556 0.457 -1.82
9 C28 C C9 N Y N 0 5.511 -2.774 -1.512
10 O01 O O1 N N N 0 0.765 2.246 -1.248
11 C02 C C10 N N N 0 -0.327 1.943 -0.815
12 N03 N N1 N N N 0 -0.497 0.766 -0.182
13 C04 C C11 N Y N 0 -1.77 0.192 -0.102
14 C05 C C12 N Y N 0 -1.904 -1.185 0.028
15 C06 C C13 N Y N 0 -3.158 -1.752 0.107
16 C07 C C14 N Y N 0 -4.292 -0.943 0.056
17 C08 C C15 N Y N 0 -5.643 -1.552 0.141
18 C09 C C16 N Y N 0 -5.781 -2.932 0.278
19 C11 C C17 N Y N 0 -8.163 -2.686 0.307
20 C12 C C18 N Y N 0 -8.032 -1.316 0.171
21 C14 C C19 N Y N 0 -4.156 0.438 -0.075
22 C16 C C20 R N N 0 0.651 0.086 0.424
23 C18 C C21 N Y N 0 0.846 2.287 1.61
24 N19 N N2 N Y N 0 1.382 3.075 2.522
25 C23 C C22 N N N 0 1.672 -0.221 -0.641
26 N24 N N3 N N N 0 2.932 -0.548 -0.292
27 C25 C C23 S N N 0 3.924 -0.846 -1.328
28 C27 C C24 N Y N 0 4.995 -1.738 -0.755
29 C29 C C25 N Y N 0 6.493 -3.592 -0.986
30 C30 C C26 N Y N 0 6.96 -3.375 0.297
31 C31 C C27 N Y N 0 6.445 -2.339 1.054
32 C32 C C28 N Y N 0 5.462 -1.521 0.528
33 O33 O O2 N N N 0 1.36 -0.173 -1.812
34 C34 C C29 N N N 0 -1.492 2.883 -0.986
35 CL35 CL CL1 N N N 0 -0.933 4.393 -1.795
36 H1 H H1 N N N 0 -7.148 -4.561 0.469
37 H5 H H5 N N N 0 3.582 1.013 3.918
38 H2 H H2 N N N 0 -6.676 0.326 -0.015
39 H3 H H3 N N N 0 -2.793 2.071 -0.25
40 H4 H H4 N N N 0 2.748 3.325 4.066
41 H6 H H6 N N N 0 2.61 -0.523 2.222
42 H7 H H7 N N N 0 5.042 0.963 -0.985
43 H8 H H8 N N N 0 5.294 0.235 -2.59
44 H9 H H9 N N N 0 3.781 1.102 -2.234
45 H10 H H10 N N N 0 5.142 -2.947 -2.512
46 H11 H H11 N N N 0 -1.025 -1.811 0.067
47 H12 H H12 N N N 0 -3.262 -2.823 0.208
48 H13 H H13 N N N 0 -4.905 -3.562 0.318
49 H14 H H14 N N N 0 -9.146 -3.128 0.37
50 H15 H H15 N N N 0 -8.912 -0.691 0.132
51 H16 H H16 N N N 0 -5.033 1.066 -0.114
52 H17 H H17 N N N 0 0.32 -0.842 0.889
53 H18 H H18 N N N 0 0.069 2.67 0.965
54 H19 H H19 N N N 0 3.181 -0.586 0.644
55 H20 H H20 N N N 0 3.438 -1.352 -2.162
56 H21 H H21 N N N 0 6.895 -4.401 -1.577
57 H22 H H22 N N N 0 7.727 -4.014 0.708
58 H23 H H23 N N N 0 6.81 -2.17 2.056
59 H24 H H24 N N N 0 5.06 -0.712 1.12
60 H25 H H25 N N N 0 -2.258 2.405 -1.597
61 H26 H H26 N N N 0 -1.908 3.127 -0.008