Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 6PT

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 47


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C18 C C1 N Y N 0 3.533 -0.006 1.051
2 C9 C C2 N Y N 0 -6.008 -1.69 1.109
3 C10 C C3 N Y N 0 -6.054 -0.369 0.702
4 C11 C C4 N Y N 0 -4.888 0.3 0.388
5 C16 C C5 N Y N 0 4.477 -0.911 -0.986
6 C12 C C6 N N N 0 -1.465 -1.781 -0.887
7 C6 C C7 N Y N 0 -3.663 -0.359 0.481
8 C5 C C8 N N N 0 -1.55 4.611 -0.603
9 C20 C C9 N N N 0 5.959 -0.56 0.983
10 C3 C C10 N N N 0 -0.152 0.333 -0.838
11 O2 O O1 N N N 0 6.094 -0.194 2.134
12 C13 C C11 N N N 0 -2.474 -2.201 -1.925
13 N2 N N1 N N N 0 0.897 -0.292 -1.482
14 C14 C C12 N Y N 0 2.146 -0.357 -0.874
15 C15 C C13 N Y N 0 3.24 -0.846 -1.584
16 O3 O O2 N N N 0 7.019 -1.028 0.296
17 C17 C C14 N Y N 0 4.634 -0.491 0.339
18 C19 C C15 N Y N 0 2.299 0.058 0.447
19 C21 C C16 N N N 0 -0.068 1.75 -0.46
20 O4 O O3 N N N 0 0.935 2.395 -0.712
21 C2 C C17 N N N 0 -1.322 -0.363 -0.534
22 O1 O O4 N N N 0 -0.771 -2.614 -0.343
23 C1 C C18 N N N 0 -2.407 0.353 0.146
24 N1 N N2 N N N 0 -2.273 1.619 0.458
25 N3 N N3 N N N 0 -1.109 2.332 0.167
26 C4 C C19 N N N 0 -1.02 3.746 0.542
27 C8 C C20 N Y N 0 -4.796 -2.349 1.204
28 C7 C C21 N Y N 0 -3.623 -1.691 0.892
29 H1 H H1 N N N 0 3.651 0.315 2.076
30 H2 H H2 N N N 0 -6.923 -2.208 1.358
31 H3 H H3 N N N 0 -7.003 0.141 0.63
32 H4 H H4 N N N 0 -4.924 1.331 0.07
33 H5 H H5 N N N 0 5.324 -1.291 -1.537
34 H6 H H6 N N N 0 -2.59 4.352 -0.803
35 H7 H H7 N N N 0 -1.485 5.663 -0.324
36 H8 H H8 N N N 0 -0.953 4.435 -1.498
37 H9 H H9 N N N 0 -1.998 -2.226 -2.905
38 H10 H H10 N N N 0 -2.855 -3.193 -1.68
39 H11 H H11 N N N 0 -3.299 -1.489 -1.939
40 H12 H H12 N N N 0 0.763 -0.685 -2.358
41 H13 H H13 N N N 0 3.116 -1.173 -2.606
42 H14 H H14 N N N 0 7.867 -1.054 0.76
43 H15 H H15 N N N 0 1.447 0.429 0.998
44 H16 H H16 N N N 0 0.019 4.004 0.742
45 H17 H H17 N N N 0 -1.618 3.922 1.437
46 H18 H H18 N N N 0 -4.766 -3.38 1.526
47 H19 H H19 N N N 0 -2.677 -2.207 0.966