Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : 72B

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 70


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N Y N 0 75.94 30.738 5.551
2 N2 N N2 N Y N 0 77.885 31.82 7.192
3 C1 C C1 N N N 0 75.289 33.178 8.972
4 C2 C C2 N N N 0 76.28 27.451 7.488
5 C3 C C3 N N N 0 74.935 27.638 8.207
6 C4 C C4 N N N 0 73.408 29.615 9.349
7 C5 C C5 N N N 0 73.516 27.885 12.513
8 RU RU RU N N N 0 76.129 30.704 7.656
9 S1 S S1 N N N 0 74.318 29.319 7.854
10 S2 S S2 N N N 0 76.573 30.847 9.902
11 S3 S S3 N N N 0 77.416 28.833 7.584
12 F1 F F1 N N N 0 80.785 33.513 8.297
13 S4 S S4 N N N 0 75.534 34.078 10.237
14 O1 O O1 N N N 0 81.077 33.988 3.158
15 O2 O O2 N N N 0 77.758 32.115 0.63
16 O3 O O3 N N N 0 73.53 29.539 0.694
17 N3 N N3 N N N 0 75.099 32.405 7.894
18 N4 N N4 N N N 0 73.205 29.234 11.848
19 N5 N N5 N N N 0 79.55 33.15 1.623
20 C6 C C6 N Y N 0 80.044 33.197 6.063
21 C7 C C7 N Y N 0 79.093 32.665 5.22
22 C8 C C8 N Y N 0 79.057 32.723 3.819
23 C9 C C9 N N N 0 80.023 33.361 2.897
24 C10 C C10 N N N 0 78.37 32.433 1.639
25 C11 C C11 N Y N 0 78.078 32.176 3.04
26 C12 C C12 N Y N 0 77.001 31.483 3.658
27 C13 C C13 N Y N 0 75.851 30.809 3.222
28 C14 C C14 N Y N 0 75.341 30.563 2.03
29 C15 C C15 N Y N 0 74.17 29.861 1.883
30 C16 C C16 N Y N 0 73.526 29.409 2.99
31 C17 C C17 N Y N 0 74.048 29.651 4.325
32 C18 C C18 N Y N 0 75.218 30.358 4.44
33 C19 C C19 N Y N 0 77.016 31.414 5.034
34 C20 C C20 N Y N 0 78.021 31.978 5.833
35 C21 C C21 N N N 0 74.132 29.556 10.681
36 C25 C C25 N N N 0 74.28 29.89 -0.547
37 C22 C C22 N N N 0 75.133 30.683 10.968
38 C23 C C23 N N N 0 77.57 29.3 10.324
39 C24 C C24 N N N 0 78.167 28.688 9.237
40 C26 C C26 N Y N 0 78.853 32.356 7.995
41 C27 C C27 N Y N 0 79.872 33.007 7.457
42 H1 H H1 N N N 0 74.903 34.049 8.422
43 H2 H H2 N N N 0 74.459 32.672 9.487
44 H3 H H3 N N N 0 76.071 27.26 6.425
45 H4 H H4 N N N 0 76.778 26.574 7.927
46 H5 H H5 N N N 0 74.212 26.893 7.842
47 H6 H H6 N N N 0 75.073 27.514 9.291
48 H9 H H9 N N N 0 72.815 27.714 13.343
49 H7 H H7 N N N 0 72.971 30.621 9.265
50 H8 H H8 N N N 0 72.602 28.867 9.388
51 H10 H H10 N N N 0 73.411 27.078 11.773
52 H11 H H11 N N N 0 74.546 27.896 12.9
53 H12 H H12 N N N 0 74.36 34.603 10.427
54 H14 H H14 N N N 0 73.296 29.955 12.535
55 H16 H H16 N N N 0 80.002 33.474 0.792
56 H17 H H17 N N N 0 80.892 33.741 5.674
57 H18 H H18 N N N 0 75.856 30.922 1.151
58 H19 H H19 N N N 0 72.605 28.857 2.876
59 H21 H H21 N N N 0 74.766 28.661 10.596
60 H20 H H20 N N N 0 73.531 29.285 5.2
61 H22 H H22 N N N 0 75.504 30.535 11.993
62 H23 H H23 N N N 0 74.578 31.631 10.912
63 H24 H H24 N N N 0 76.893 28.574 10.798
64 H25 H H25 N N N 0 78.36 29.584 11.035
65 H26 H H26 N N N 0 78.222 27.614 9.468
66 H27 H H27 N N N 0 79.185 29.099 9.161
67 H28 H H28 N N N 0 73.691 29.596 -1.428
68 H29 H H29 N N N 0 74.46 30.975 -0.572
69 H30 H H30 N N N 0 75.243 29.358 -0.556
70 H31 H H31 N N N 0 78.786 32.248 9.068