Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : 78N

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 56


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O22 O O22 N N N 0 9.659 2.048 0.49
2 C19 C C19 N N N 0 8.773 0.941 0.665
3 C18 C C18 R N N 0 7.408 1.28 0.062
4 O20 O O20 N N N 0 7.539 1.439 -1.352
5 C17 C C17 N N N 0 6.424 0.147 0.359
6 O16 O O16 N N N 0 5.101 0.519 -0.11
7 C8 C C8 N N N 0 4.115 -0.372 0.076
8 O15 O O15 N N N 0 4.349 -1.429 0.613
9 C7 C C7 N N N 0 2.715 -0.055 -0.385
10 C6 C C6 N N N 0 1.791 -1.229 -0.055
11 C5 C C5 N N N 0 0.371 -0.907 -0.523
12 C4 C C4 N N N 0 -0.553 -2.081 -0.193
13 C3 C C3 N N N 0 -1.974 -1.759 -0.661
14 C2 C C2 N N N 0 -2.884 -2.915 -0.336
15 C1 C C1 N N N 0 -3.994 -2.709 0.328
16 C9 C C9 N N N 0 -4.447 -1.302 0.62
17 C10 C C10 N N N 0 -5.883 -1.115 0.125
18 C11 C C11 N N N 0 -6.343 0.314 0.421
19 C12 C C12 N N N 0 -7.778 0.5 -0.073
20 C13 C C13 N N N 0 -8.238 1.929 0.223
21 C15 C C15 N N N 0 -10.134 3.545 0.025
22 C14 C C14 N N N 0 -9.674 2.116 -0.272
23 H22 H H22 N N N 0 10.545 1.903 0.849
24 H191 H H191 N N N 0 9.183 0.064 0.166
25 H192 H H192 N N N 0 8.658 0.733 1.729
26 H18 H H18 N N N 0 7.037 2.207 0.499
27 H20 H H20 N N N 0 7.865 0.65 -1.808
28 H171 H H171 N N N 0 6.748 -0.76 -0.153
29 H172 H H172 N N N 0 6.391 -0.034 1.433
30 H71 H H71 N N N 0 2.36 0.841 0.124
31 H72 H H72 N N N 0 2.717 0.115 -1.461
32 H61C H H61C N N N 0 2.147 -2.125 -0.564
33 H62C H H62C N N N 0 1.79 -1.399 1.021
34 H51C H H51C N N N 0 0.015 -0.011 -0.014
35 H52C H H52C N N N 0 0.372 -0.737 -1.599
36 H41C H H41C N N N 0 -0.198 -2.977 -0.702
37 H42C H H42C N N N 0 -0.555 -2.251 0.883
38 H31C H H31C N N N 0 -2.329 -0.863 -0.152
39 H32C H H32C N N N 0 -1.972 -1.589 -1.738
40 H2 H H2 N N N 0 -2.621 -3.914 -0.652
41 H1 H H1 N N N 0 -4.585 -3.547 0.666
42 H91C H H91C N N N 0 -4.407 -1.122 1.694
43 H92C H H92C N N N 0 -3.792 -0.596 0.109
44 H101 H H101 N N N 0 -5.923 -1.294 -0.949
45 H102 H H102 N N N 0 -6.538 -1.821 0.636
46 H111 H H111 N N N 0 -6.302 0.493 1.496
47 H112 H H112 N N N 0 -5.688 1.02 -0.09
48 H121 H H121 N N N 0 -7.819 0.321 -1.148
49 H122 H H122 N N N 0 -8.433 -0.205 0.438
50 H131 H H131 N N N 0 -8.198 2.109 1.297
51 H132 H H132 N N N 0 -7.583 2.635 -0.288
52 H141 H H141 N N N 0 -9.714 1.937 -1.346
53 H142 H H142 N N N 0 -10.329 1.41 0.239
54 H151 H H151 N N N 0 -11.157 3.678 -0.328
55 H152 H H152 N N N 0 -10.094 3.724 1.099
56 H153 H H153 N N N 0 -9.479 4.251 -0.486