Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 78U

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 30


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 OXT O O1 N N N 0 -4.222 -0.436 0.483
2 C C C1 N N N 0 -3.378 0.377 -0.172
3 O O O2 N N N 0 -3.705 1.513 -0.422
4 CA C C2 S N N 0 -2.023 -0.129 -0.596
5 N N N1 N N N 0 -1.496 0.725 -1.669
6 CB C C3 S N N 0 -1.069 -0.094 0.599
7 CAG C C4 N N N 0 -1.618 -0.983 1.716
8 CG C C5 N Y N 0 0.286 -0.599 0.175
9 CD2 C C6 N Y N 0 1.548 0.142 0.228
10 CE3 C C7 N Y N 0 1.901 1.429 0.64
11 CZ3 C C8 N Y N 0 3.204 1.833 0.561
12 CH2 C C9 N Y N 0 4.18 0.974 0.073
13 CZ2 C C10 N Y N 0 3.854 -0.299 -0.34
14 CE2 C C11 N Y N 0 2.533 -0.731 -0.267
15 NE1 N N2 N Y N 0 1.903 -1.912 -0.592
16 CD1 C C12 N Y N 0 0.566 -1.816 -0.317
17 H1 H H1 N N N 0 -5.08 -0.067 0.734
18 H2 H H2 N N N 0 -2.115 -1.153 -0.959
19 H3 H H3 N N N 0 -1.402 1.68 -1.358
20 H4 H H4 N N N 0 -0.618 0.369 -2.015
21 H6 H H6 N N N 0 -0.978 0.93 0.961
22 H7 H H7 N N N 0 -0.938 -0.958 2.568
23 H8 H H8 N N N 0 -2.598 -0.617 2.023
24 H9 H H9 N N N 0 -1.709 -2.007 1.354
25 H10 H H10 N N N 0 1.148 2.102 1.02
26 H11 H H11 N N N 0 3.477 2.828 0.879
27 H12 H H12 N N N 0 5.206 1.308 0.016
28 H13 H H13 N N N 0 4.62 -0.959 -0.718
29 H14 H H14 N N N 0 2.342 -2.695 -0.959
30 H15 H H15 N N N 0 -0.157 -2.603 -0.475