Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 7E9

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 53


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O21 O O21 N N N 0 7.214 -0.415 1.512
2 C20 C C20 N N N 0 6.929 0.452 0.412
3 O19 O O19 N N N 0 4.031 1.208 -0.875
4 C17 C C17 N N N 0 6.928 -1.571 -1.054
5 O2 O O2 N N N 0 7.213 -2.346 0.112
6 O1 O O1 N N N 0 4.852 -0.701 -0.123
7 C14 C C14 N N N 0 -9.883 -2.6 0.397
8 C13 C C13 N N N 0 -8.451 -2.394 -0.104
9 C12 C C12 N N N 0 -8.022 -0.949 0.158
10 C11 C C11 N N N 0 -6.591 -0.743 -0.343
11 C10 C C10 N N N 0 -6.162 0.702 -0.081
12 C80 C C80 N N N 0 3.841 0.164 -0.298
13 C9 C C9 N N N 0 -4.731 0.908 -0.581
14 C15 C C15 N N N 0 6.147 -0.317 -0.655
15 C8 C C8 N N N 0 -4.308 2.331 -0.323
16 C7 C C7 N N N 0 -3.19 2.577 0.312
17 C6 C C6 N N N 0 -2.243 1.449 0.636
18 C5 C C5 N N N 0 -0.849 1.786 0.103
19 C4 C C4 N N N 0 0.112 0.641 0.432
20 C3 C C3 N N N 0 1.506 0.977 -0.101
21 C2 C C2 N N N 0 2.467 -0.167 0.227
22 H21 H H21 N N N 0 7.708 0.006 2.228
23 H201 H H201 N N N 0 6.334 1.296 0.761
24 H202 H H202 N N N 0 7.863 0.817 -0.014
25 H15 H H15 N N N 0 6.007 0.318 -1.53
26 H171 H H171 N N N 0 7.862 -1.28 -1.534
27 H172 H H172 N N N 0 6.332 -2.164 -1.748
28 H2 H H2 N N N 0 7.707 -3.158 -0.066
29 H21C H H21C N N N 0 2.112 -1.086 -0.24
30 H22C H H22C N N N 0 2.514 -0.304 1.308
31 H31C H H31C N N N 0 1.459 1.114 -1.181
32 H32C H H32C N N N 0 1.862 1.896 0.366
33 H41C H H41C N N N 0 0.159 0.505 1.512
34 H42C H H42C N N N 0 -0.244 -0.277 -0.036
35 H51C H H51C N N N 0 -0.896 1.922 -0.977
36 H52C H H52C N N N 0 -0.493 2.704 0.57
37 H61C H H61C N N N 0 -2.196 1.313 1.716
38 H62C H H62C N N N 0 -2.599 0.531 0.169
39 H7 H H7 N N N 0 -2.946 3.587 0.605
40 H8 H H8 N N N 0 -4.927 3.148 -0.663
41 H91 H H91 N N N 0 -4.061 0.228 -0.055
42 H92 H H92 N N N 0 -4.688 0.704 -1.651
43 HA1 H HA1 N N N 0 -6.832 1.381 -0.607
44 HB2 H HB2 N N N 0 -6.205 0.905 0.989
45 HB1 H HB1 N N N 0 -5.921 -1.423 0.184
46 HC2 H HC2 N N N 0 -6.548 -0.947 -1.413
47 HC1 H HC1 N N N 0 -8.693 -0.269 -0.369
48 HD2 H HD2 N N N 0 -8.066 -0.745 1.228
49 HD1 H HD1 N N N 0 -7.781 -3.073 0.422
50 HE2 H HE2 N N N 0 -8.408 -2.597 -1.174
51 HE1 H HE1 N N N 0 -10.188 -3.629 0.21
52 HF2 H HF2 N N N 0 -9.926 -2.396 1.467
53 HG3 H HG3 N N N 0 -10.553 -1.92 -0.13