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PDBeChem : Atoms of Molecule
Molecule : 7EJ
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 82
Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
1 |
C4 |
C |
C1 |
N |
N |
N |
0 |
-2.339 |
-3.294 |
-0.486 |
2 |
C5 |
C |
C2 |
N |
N |
N |
0 |
-2.592 |
-1.919 |
0.137 |
3 |
C6 |
C |
C3 |
N |
N |
N |
0 |
-2.904 |
-0.908 |
-0.968 |
4 |
C8 |
C |
C4 |
N |
Y |
N |
0 |
-2.058 |
1.336 |
-0.165 |
5 |
C10 |
C |
C5 |
N |
Y |
N |
0 |
-3.984 |
2.228 |
0.539 |
6 |
C13 |
C |
C6 |
N |
Y |
N |
0 |
-5.661 |
-1.072 |
-0.133 |
7 |
C15 |
C |
C7 |
N |
Y |
N |
0 |
-8.05 |
-0.907 |
-0.117 |
8 |
C17 |
C |
C8 |
N |
Y |
N |
0 |
-6.731 |
1.084 |
0.063 |
9 |
C21 |
C |
C9 |
N |
N |
N |
0 |
-0.289 |
3.522 |
-0.081 |
10 |
C22 |
C |
C10 |
N |
N |
N |
0 |
-0.298 |
3.654 |
1.443 |
11 |
C24 |
C |
C11 |
N |
N |
N |
0 |
1.126 |
3.491 |
1.977 |
12 |
C1 |
C |
C12 |
N |
N |
N |
0 |
-1.263 |
-6.557 |
0.96 |
13 |
O2 |
O |
O1 |
N |
N |
N |
0 |
-1.673 |
-5.56 |
0.022 |
14 |
C3 |
C |
C13 |
N |
N |
N |
0 |
-1.908 |
-4.277 |
0.604 |
15 |
N7 |
N |
N1 |
N |
Y |
N |
0 |
-3.066 |
0.424 |
-0.38 |
16 |
C9 |
C |
C14 |
N |
Y |
N |
0 |
-2.616 |
2.461 |
0.41 |
17 |
C11 |
C |
C15 |
N |
Y |
N |
0 |
-4.242 |
0.967 |
0.047 |
18 |
C12 |
C |
C16 |
N |
Y |
N |
0 |
-5.568 |
0.315 |
-0.009 |
19 |
C14 |
C |
C17 |
N |
Y |
N |
0 |
-6.901 |
-1.674 |
-0.189 |
20 |
C16 |
C |
C18 |
N |
Y |
N |
0 |
-7.964 |
0.468 |
0.011 |
21 |
C18 |
C |
C19 |
N |
N |
N |
0 |
-0.64 |
1.144 |
-0.483 |
22 |
O19 |
O |
O2 |
N |
N |
N |
0 |
-0.226 |
0.038 |
-0.775 |
23 |
N20 |
N |
N2 |
N |
N |
N |
0 |
0.205 |
2.194 |
-0.454 |
24 |
C23 |
C |
C20 |
N |
N |
N |
0 |
-0.835 |
5.032 |
1.832 |
25 |
C25 |
C |
C21 |
S |
N |
N |
0 |
1.618 |
2.007 |
-0.794 |
26 |
C27 |
C |
C22 |
N |
N |
N |
0 |
1.741 |
1.618 |
-2.269 |
27 |
N28 |
N |
N3 |
N |
N |
N |
0 |
3.155 |
1.41 |
-2.606 |
28 |
C29 |
C |
C23 |
N |
N |
N |
0 |
3.732 |
0.312 |
-1.819 |
29 |
C30 |
C |
C24 |
R |
N |
N |
0 |
3.668 |
0.661 |
-0.33 |
30 |
C32 |
C |
C25 |
N |
N |
N |
0 |
2.209 |
0.892 |
0.073 |
31 |
C33 |
C |
C26 |
N |
N |
N |
0 |
4.24 |
-0.475 |
0.478 |
32 |
O34 |
O |
O3 |
N |
N |
N |
0 |
3.503 |
-1.312 |
0.953 |
33 |
N35 |
N |
N4 |
N |
N |
N |
0 |
5.571 |
-0.56 |
0.672 |
34 |
C36 |
C |
C27 |
N |
N |
N |
0 |
6.475 |
0.5 |
0.199 |
35 |
C37 |
C |
C28 |
N |
N |
N |
0 |
7.606 |
-0.152 |
-0.606 |
36 |
O38 |
O |
O4 |
N |
N |
N |
0 |
8.2 |
-1.191 |
0.175 |
37 |
C39 |
C |
C29 |
N |
N |
N |
0 |
7.309 |
-2.26 |
0.502 |
38 |
C40 |
C |
C30 |
N |
N |
N |
0 |
6.163 |
-1.713 |
1.368 |
39 |
H1 |
H |
H1 |
N |
N |
N |
0 |
-3.254 |
-3.653 |
-0.958 |
40 |
H2 |
H |
H2 |
N |
N |
N |
0 |
-1.552 |
-3.214 |
-1.236 |
41 |
H3 |
H |
H3 |
N |
N |
N |
0 |
-3.437 |
-1.981 |
0.822 |
42 |
H4 |
H |
H4 |
N |
N |
N |
0 |
-1.704 |
-1.599 |
0.682 |
43 |
H5 |
H |
H5 |
N |
N |
N |
0 |
-2.084 |
-0.89 |
-1.686 |
44 |
H6 |
H |
H6 |
N |
N |
N |
0 |
-3.824 |
-1.196 |
-1.475 |
45 |
H7 |
H |
H7 |
N |
N |
N |
0 |
-4.711 |
2.913 |
0.951 |
46 |
H8 |
H |
H8 |
N |
N |
N |
0 |
-4.765 |
-1.673 |
-0.189 |
47 |
H9 |
H |
H9 |
N |
N |
N |
0 |
-9.019 |
-1.383 |
-0.162 |
48 |
H10 |
H |
H10 |
N |
N |
N |
0 |
-6.665 |
2.157 |
0.159 |
49 |
H11 |
H |
H11 |
N |
N |
N |
0 |
-1.301 |
3.653 |
-0.463 |
50 |
H12 |
H |
H12 |
N |
N |
N |
0 |
0.363 |
4.285 |
-0.508 |
51 |
H13 |
H |
H13 |
N |
N |
N |
0 |
-0.937 |
2.881 |
1.871 |
52 |
H14 |
H |
H14 |
N |
N |
N |
0 |
1.749 |
4.305 |
1.607 |
53 |
H15 |
H |
H15 |
N |
N |
N |
0 |
1.11 |
3.513 |
3.067 |
54 |
H16 |
H |
H16 |
N |
N |
N |
0 |
1.535 |
2.539 |
1.64 |
55 |
H17 |
H |
H17 |
N |
N |
N |
0 |
-0.334 |
-6.246 |
1.439 |
56 |
H18 |
H |
H18 |
N |
N |
N |
0 |
-2.037 |
-6.684 |
1.717 |
57 |
H19 |
H |
H19 |
N |
N |
N |
0 |
-1.104 |
-7.502 |
0.44 |
58 |
H20 |
H |
H20 |
N |
N |
N |
0 |
-0.993 |
-3.918 |
1.075 |
59 |
H21 |
H |
H21 |
N |
N |
N |
0 |
-2.696 |
-4.357 |
1.353 |
60 |
H22 |
H |
H22 |
N |
N |
N |
0 |
-2.089 |
3.357 |
0.702 |
61 |
H23 |
H |
H23 |
N |
N |
N |
0 |
-6.976 |
-2.747 |
-0.29 |
62 |
H24 |
H |
H24 |
N |
N |
N |
0 |
-8.865 |
1.062 |
0.067 |
63 |
H25 |
H |
H25 |
N |
N |
N |
0 |
-1.879 |
5.114 |
1.531 |
64 |
H26 |
H |
H26 |
N |
N |
N |
0 |
-0.757 |
5.161 |
2.912 |
65 |
H27 |
H |
H27 |
N |
N |
N |
0 |
-0.251 |
5.804 |
1.332 |
66 |
H28 |
H |
H28 |
N |
N |
N |
0 |
2.161 |
2.934 |
-0.615 |
67 |
H29 |
H |
H29 |
N |
N |
N |
0 |
1.185 |
0.698 |
-2.45 |
68 |
H30 |
H |
H30 |
N |
N |
N |
0 |
1.334 |
2.417 |
-2.89 |
69 |
H31 |
H |
H31 |
N |
N |
N |
0 |
3.271 |
1.246 |
-3.594 |
70 |
H33 |
H |
H33 |
N |
N |
N |
0 |
3.167 |
-0.602 |
-2.002 |
71 |
H34 |
H |
H34 |
N |
N |
N |
0 |
4.771 |
0.162 |
-2.113 |
72 |
H35 |
H |
H35 |
N |
N |
N |
0 |
4.245 |
1.567 |
-0.144 |
73 |
H36 |
H |
H36 |
N |
N |
N |
0 |
2.163 |
1.183 |
1.122 |
74 |
H37 |
H |
H37 |
N |
N |
N |
0 |
1.641 |
-0.026 |
-0.076 |
75 |
H38 |
H |
H38 |
N |
N |
N |
0 |
5.926 |
1.195 |
-0.437 |
76 |
H39 |
H |
H39 |
N |
N |
N |
0 |
6.893 |
1.035 |
1.052 |
77 |
H40 |
H |
H40 |
N |
N |
N |
0 |
7.202 |
-0.573 |
-1.526 |
78 |
H41 |
H |
H41 |
N |
N |
N |
0 |
8.359 |
0.598 |
-0.848 |
79 |
H42 |
H |
H42 |
N |
N |
N |
0 |
6.904 |
-2.689 |
-0.414 |
80 |
H43 |
H |
H43 |
N |
N |
N |
0 |
7.849 |
-3.028 |
1.056 |
81 |
H44 |
H |
H44 |
N |
N |
N |
0 |
6.549 |
-1.398 |
2.338 |
82 |
H45 |
H |
H45 |
N |
N |
N |
0 |
5.406 |
-2.485 |
1.508 |
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