Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : 7KM

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 44


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C10 C C1 N Y N 0 -2.258 2.566 0.196
2 C13 C C2 N Y N 0 -4.89 3.376 -0.13
3 C15 C C3 N N N 0 0.089 -2.045 0.386
4 C22 C C4 N Y N 0 3.619 0.762 -0.14
5 C24 C C5 N Y N 0 4.474 2.72 0.941
6 C26 C C6 N Y N 0 2.865 2.931 -0.82
7 C01 C C7 N N N 0 -4.737 -3.143 -0.278
8 C02 C C8 N Y N 0 -3.639 -2.125 -0.108
9 C03 C C9 N Y N 0 -2.33 -2.543 0.055
10 F04 F F1 N N N 0 -2.039 -3.862 0.059
11 C05 C C10 N Y N 0 -1.309 -1.6 0.213
12 C06 C C11 N Y N 0 -1.615 -0.24 0.208
13 C07 C C12 N Y N 0 -2.933 0.17 0.045
14 C08 C C13 N Y N 0 -3.943 -0.779 -0.119
15 C09 C C14 N Y N 0 -3.266 1.616 0.038
16 C11 C C15 N Y N 0 -2.573 3.91 0.19
17 C12 C C16 N Y N 0 -3.885 4.314 0.027
18 C14 C C17 N Y N 0 -4.586 2.03 -0.125
19 O16 O O1 N N N 0 0.354 -3.231 0.391
20 N17 N N1 N N N 0 1.071 -1.134 0.539
21 N18 N N2 N N N 0 2.398 -1.556 0.703
22 S19 S S1 N N N 0 3.578 -0.991 -0.312
23 O20 O O2 N N N 0 3.128 -1.254 -1.635
24 O21 O O3 N N N 0 4.812 -1.474 0.2
25 C23 C C18 N Y N 0 4.441 1.344 0.806
26 C25 C C19 N Y N 0 3.684 3.513 0.13
27 C27 C C20 N Y N 0 2.833 1.555 -0.955
28 H101 H H1 N N N 0 -1.234 2.251 0.327
29 H131 H H2 N N N 0 -5.913 3.697 -0.256
30 H241 H H3 N N N 0 5.116 3.175 1.681
31 H261 H H4 N N N 0 2.248 3.55 -1.454
32 H012 H H5 N N N 0 -5.136 -3.415 0.699
33 H013 H H6 N N N 0 -5.533 -2.72 -0.891
34 H011 H H7 N N N 0 -4.336 -4.031 -0.767
35 H061 H H8 N N N 0 -0.831 0.492 0.331
36 H081 H H9 N N N 0 -4.966 -0.459 -0.25
37 H111 H H10 N N N 0 -1.793 4.647 0.312
38 H121 H H11 N N N 0 -4.127 5.367 0.023
39 H141 H H12 N N N 0 -5.371 1.298 -0.247
40 H171 H H13 N N N 0 0.86 -0.188 0.535
41 H181 H H14 N N N 0 2.624 -2.178 1.412
42 H231 H H17 N N N 0 5.058 0.725 1.44
43 H251 H H18 N N N 0 3.709 4.587 0.236
44 H271 H H19 N N N 0 2.194 1.1 -1.697