Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 7TE

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 36


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1' C C1 R N N 0 -0.658 -1.621 0.103
2 C2 C C2 N Y N 0 -4.336 -0.026 -1.917
3 C2' C C3 R N N 0 0.43 -0.855 -0.675
4 C3' C C4 S N N 0 1.724 -1.109 0.135
5 C4 C C5 N Y N 0 -2.794 -0.305 -0.235
6 C4' C C6 N N N 0 1.363 -2.387 0.934
7 C5 C C7 N Y N 0 -3.531 0.578 0.572
8 C6 C C8 N Y N 0 -4.705 1.14 0.041
9 C8 C C9 N Y N 0 -1.812 -0.07 1.725
10 CP C C10 N N N 0 3.387 0.19 1.272
11 N1 N N1 N Y N 0 -5.061 0.809 -1.196
12 N3 N N2 N Y N 0 -3.23 -0.576 -1.462
13 N6 N N3 N N N 0 -5.471 2.016 0.788
14 N7 N N4 N Y N 0 -2.877 0.678 1.754
15 N9 N N5 N Y N 0 -1.717 -0.697 0.518
16 O1P O O1 N N N 0 3.517 2.263 -0.46
17 O2' O O2 N N N 0 0.558 -1.377 -1.999
18 O2P O O3 N N N 0 5.733 1.194 0.105
19 O3' O O4 N N N 0 1.997 -0.016 1.015
20 O4' O O5 N N N 0 -0.031 -2.197 1.261
21 P P P1 N N N 0 4.166 0.961 -0.184
22 H1 H H1 N N N 0 -1.078 -2.408 -0.524
23 H2 H H2 N N N 0 -4.664 -0.271 -2.916
24 H3 H H3 N N N 0 0.199 0.209 -0.706
25 H4 H H4 N N N 0 2.569 -1.291 -0.529
26 H5 H H5 N N N 0 1.495 -3.275 0.316
27 H6 H H6 N N N 0 1.964 -2.455 1.84
28 H7 H H7 N N N 0 -1.108 -0.177 2.537
29 H8 H H8 N N N 0 3.504 0.845 2.136
30 H9 H H9 N N N 0 3.865 -0.768 1.475
31 H10 H H10 N N N 0 -5.2 2.25 1.69
32 H11 H H11 N N N 0 -6.279 2.398 0.41
33 H12 H H12 N N Y 0 1.229 -0.931 -2.534
34 H13 H H13 N N N 0 6.212 1.602 -0.629
35 H14 H H14 N N Y 0 4.396 -0.878 -1.35
36 O3P O O6 N N Y 0 3.994 -0.005 -1.46