Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 83B

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 41


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N N N 0 -7.284 -0.7 1.614
2 C2 C C2 N N N 0 -7.388 -0.814 0.115
3 C3 C C3 N N N 0 -6.514 -0.208 -0.651
4 C4 C C4 N N N 0 -5.335 0.499 -0.034
5 C5 C C5 N N N 0 -4.04 -0.033 -0.652
6 C6 C C6 S N N 0 -2.843 0.686 -0.026
7 C7 C C7 N N N 0 -1.546 0.069 -0.553
8 C8 C C8 N N N 0 -0.352 0.701 0.166
9 C10 C C9 N N N 0 -8.497 -1.625 -0.504
10 C11 C C10 N N N 0 -2.888 2.17 -0.396
11 O9 O O1 N N N 0 0.86 0.125 -0.326
12 O13 O O2 N N N 0 3.435 -0.384 -0.466
13 O15 O O3 N N N 0 5.917 0.483 -0.44
14 O16 O O4 N N N 0 2.366 0.404 1.68
15 O17 O O5 N N N 0 5.045 -1.062 1.356
16 O18 O O6 N N N 0 2.598 2.092 -0.182
17 O19 O O7 N N N 0 5.414 -2.049 -0.937
18 P12 P P1 N N N 0 2.316 0.556 0.209
19 P14 P P2 N N N 0 4.955 -0.76 -0.09
20 H012 H H1 N N N 0 -8.141 -1.189 2.076
21 H011 H H2 N N N 0 -6.365 -1.179 1.952
22 H013 H H3 N N N 0 -7.27 0.353 1.898
23 H031 H H4 N N N 0 -6.638 -0.216 -1.723
24 H041 H H5 N N N 0 -5.414 1.57 -0.222
25 H042 H H6 N N N 0 -5.324 0.319 1.041
26 H052 H H7 N N N 0 -3.961 -1.103 -0.464
27 H051 H H8 N N N 0 -4.05 0.148 -1.727
28 H061 H H9 N N N 0 -2.882 0.58 1.058
29 H071 H H10 N N N 0 -1.553 -1.006 -0.368
30 H072 H H11 N N N 0 -1.464 0.252 -1.624
31 H081 H H12 N N N 0 -0.345 1.775 -0.019
32 H082 H H13 N N N 0 -0.433 0.517 1.237
33 H101 H H14 N N N 0 -9.363 -0.984 -0.676
34 H103 H H15 N N N 0 -8.158 -2.039 -1.454
35 H102 H H16 N N N 0 -8.773 -2.436 0.169
36 H111 H H17 N N N 0 -2.036 2.681 0.05
37 H112 H H18 N N N 0 -2.849 2.276 -1.48
38 H113 H H19 N N N 0 -3.813 2.609 -0.021
39 H1 H H20 N N N 0 5.908 0.736 -1.373
40 H2 H H21 N N N 0 2.581 2.265 -1.133
41 H3 H H22 N N N 0 6.322 -2.333 -0.761