Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 85K

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 52


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N Y N 0 0.016 -4.082 -1.404
2 N12 N N2 N N N 1 6.752 -0.698 1.381
3 C13 C C1 N Y N 0 1.423 -0.775 -0.868
4 C15 C C2 N Y N 0 1.644 1.587 -1.249
5 C17 C C3 N Y N 0 3.46 0.327 -0.229
6 N N N3 N Y N 0 -1.078 -3.437 -0.817
7 C C C4 N N N 0 -2.386 -4.038 -0.544
8 O O O1 N N N 0 3.341 3.832 -0.98
9 C1 C C5 N Y N 0 1.012 -3.242 -1.492
10 C12 C C6 N Y N 0 0.603 -2.005 -0.962
11 C14 C C7 N Y N 0 0.908 0.442 -1.332
12 C16 C C8 N Y N 0 2.697 -0.836 -0.313
13 C18 C C9 N N N 0 4.807 0.324 0.344
14 C19 C C10 N N N 0 5.403 -0.96 0.862
15 C1A C C11 N Y N 0 2.925 1.551 -0.696
16 C1B C C12 N N N 0 3.755 2.756 -0.586
17 C1C C C13 N Y N 0 -0.716 -2.152 -0.544
18 C1D C C14 N Y N 0 -1.56 -1.114 0.076
19 C1E C C15 N Y N 0 -1.579 -0.96 1.462
20 C1F C C16 N Y N 0 -2.372 0.015 2.041
21 C1G C C17 N Y N 0 -3.153 0.844 1.255
22 C1H C C18 N Y N 0 -3.151 0.709 -0.125
23 C1I C C19 N N N 0 -4.799 2.42 -0.201
24 C1K C C20 N N N 0 -5.241 3.684 -0.942
25 C1L C C21 N N N 0 -6.233 2.54 -0.72
26 C1M C C22 N Y N 0 -2.351 -0.268 -0.73
27 C1N C C23 N N N 0 -2.343 -0.413 -2.154
28 F F F1 N N N 0 -0.821 -1.764 2.24
29 N13 N N4 N N N 0 5.489 1.429 0.406
30 N14 N N5 N N N 0 4.985 2.65 -0.042
31 N15 N N6 N N N 0 -2.337 -0.529 -3.284
32 O1 O O2 N N N 0 -3.921 1.526 -0.889
33 CL CL CL1 N N N 0 -2.389 0.199 3.767
34 H31 H H1 N N N 0 7.151 -1.558 1.728
35 H212 H H2 N N N 0 7.332 -0.332 0.641
36 H1 H H6 N N N 0 -3.158 -3.27 -0.601
37 H112 H H3 N N N 0 6.699 -0.025 2.131
38 H123 H H4 N N N 0 1.235 2.521 -1.606
39 H2 H H5 N N N 0 -2.383 -4.477 0.454
40 H3 H H7 N N N 0 -2.591 -4.814 -1.282
41 H H H8 N N N 0 1.987 -3.46 -1.903
42 H12 H H9 N N N 0 -0.083 0.474 -1.76
43 H124 H H10 N N N 0 3.09 -1.774 0.048
44 H21 H H11 N N N 0 5.46 -1.686 0.052
45 H11 H H12 N N N 0 4.776 -1.355 1.661
46 H126 H H13 N N N 0 -3.768 1.601 1.719
47 H127 H H14 N N N 0 -4.644 2.496 0.875
48 H114 H H15 N N N 0 -5.379 4.59 -0.352
49 H214 H H16 N N N 0 -4.863 3.833 -1.953
50 H213 H H17 N N N 0 -6.507 1.937 -1.585
51 H113 H H18 N N N 0 -7.023 2.694 0.016
52 H125 H H19 N N N 0 5.537 3.444 0.032