Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 89C

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 37


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C21 C C1 N Y N 0 -3.513 -0.877 0.379
2 C10 C C2 N N N 0 1.322 1.394 1.067
3 C11 C C3 N N N 0 2.456 2.104 0.652
4 C15 C C4 N Y N 0 4.374 -0.332 -1.219
5 C14 C C5 N Y N 0 3.36 0.235 -0.457
6 C01 C C6 N N N 0 -5.002 1.691 -1.779
7 O02 O O1 N N N 0 -4.905 0.533 -0.947
8 C03 C C7 N Y N 0 -3.678 0.237 -0.439
9 C04 C C8 N Y N 0 -2.592 1.045 -0.737
10 C05 C C9 N Y N 0 -1.345 0.746 -0.222
11 C06 C C10 N Y N 0 -1.177 -0.365 0.594
12 N07 N N1 N N N 0 0.087 -0.666 1.115
13 C08 C C11 N N N 0 0.24 -1.757 2.08
14 C09 C C12 N N N 0 1.186 0.064 0.719
15 O12 O O2 N N N 0 2.567 3.277 0.964
16 O13 O O3 N N N 0 3.424 1.53 -0.08
17 C16 C C13 N Y N 0 4.288 -1.653 -1.605
18 C17 C C14 N Y N 0 3.207 -2.433 -1.224
19 C18 C C15 N Y N 0 2.185 -1.887 -0.477
20 C19 C C16 N Y N 0 2.255 -0.549 -0.088
21 C20 C C17 N Y N 0 -2.264 -1.173 0.899
22 O22 O O4 N N N 0 -4.578 -1.67 0.672
23 H1 H H1 N N N 0 0.562 1.882 1.659
24 H2 H H2 N N N 0 5.228 0.262 -1.508
25 H3 H H3 N N N 0 -4.348 1.572 -2.643
26 H4 H H4 N N N 0 -6.031 1.811 -2.115
27 H5 H H5 N N N 0 -4.699 2.571 -1.212
28 H6 H H6 N N N 0 -2.721 1.909 -1.371
29 H7 H H7 N N N 0 -0.499 1.375 -0.458
30 H8 H H8 N N N 0 0.345 -2.702 1.547
31 H9 H H9 N N N 0 1.128 -1.582 2.688
32 H10 H H10 N N N 0 -0.638 -1.798 2.724
33 H11 H H11 N N N 0 5.079 -2.089 -2.197
34 H12 H H12 N N N 0 3.153 -3.466 -1.534
35 H13 H H13 N N N 0 1.336 -2.491 -0.195
36 H14 H H14 N N N 0 -2.134 -2.038 1.533
37 H15 H H15 N N N 0 -4.712 -2.395 0.046