Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : 8EY

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 45


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C23 C C1 N Y N 0 -4.1 1.564 -0.389
2 C24 C C2 N Y N 0 -4.949 0.519 -0.015
3 C25 C C3 N Y N 0 -4.42 -0.65 0.491
4 C26 C C4 N Y N 0 -3.052 -0.792 0.631
5 C22 C C5 N Y N 0 -2.72 1.419 -0.247
6 C21 C C6 N Y N 0 -2.2 0.24 0.263
7 C12 C C7 N N N 0 -0.039 1.197 0.004
8 C11 C C8 N N N 0 6.103 0.207 2.207
9 C08 C C9 N Y N 0 1.411 0.856 0.23
10 C07 C C10 N Y N 0 2.002 1.15 1.456
11 C06 C C11 N Y N 0 3.309 0.848 1.692
12 C09 C C12 N Y N 0 2.122 0.259 -0.767
13 C10 C C13 N Y N 0 3.474 -0.063 -0.562
14 N01 N N1 N Y N 0 4.195 -0.65 -1.524
15 C05 C C14 N Y N 0 4.071 0.233 0.687
16 C04 C C15 N Y N 0 5.427 -0.095 0.895
17 C03 C C16 N Y N 0 6.11 -0.692 -0.121
18 C02 C C17 N Y N 0 5.463 -0.954 -1.338
19 N02 N N2 N N N 0 6.171 -1.563 -2.364
20 N31 N N3 N N N 0 -5.076 3.74 -1.342
21 C30 C C18 N N N 0 -4.644 2.777 -0.92
22 C27 C C19 N N N 0 -5.337 -1.776 0.893
23 N28 N N4 N N N 0 -5.559 -2.662 -0.257
24 C29 C C20 N N N 0 -6.45 -3.774 0.099
25 O13 O O1 N N N 0 -0.856 0.095 0.402
26 H1 H H1 N N N 0 -6.018 0.627 -0.123
27 H2 H H2 N N N 0 -2.644 -1.71 1.028
28 H3 H H3 N N N 0 -2.058 2.223 -0.534
29 H4 H H4 N N N 0 -0.302 2.076 0.594
30 H5 H H5 N N N 0 -0.203 1.408 -1.053
31 H6 H H6 N N N 0 6.544 1.203 2.168
32 H7 H H7 N N N 0 5.369 0.166 3.012
33 H8 H H8 N N N 0 6.886 -0.529 2.391
34 H9 H H9 N N N 0 1.416 1.624 2.229
35 H10 H H10 N N N 0 3.756 1.082 2.647
36 H11 H H11 N N N 0 1.648 0.033 -1.71
37 H12 H H12 N N N 0 7.149 -0.955 0.006
38 H13 H H13 N N N 0 7.102 -1.802 -2.235
39 H14 H H14 N N N 0 5.735 -1.75 -3.21
40 H15 H H15 N N N 0 -4.882 -2.343 1.706
41 H16 H H16 N N N 0 -6.291 -1.367 1.225
42 H17 H H17 N N N 0 -4.683 -3.004 -0.624
43 H19 H H19 N N N 0 -6.003 -4.355 0.906
44 H20 H H20 N N N 0 -7.412 -3.379 0.425
45 H21 H H21 N N N 0 -6.598 -4.415 -0.771