Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 8GS

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 41


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C5 C C1 N Y N 0 4.715 1.312 0.034
2 C8 C C2 N Y N 0 3.334 -0.366 0.0
3 C10 C C3 N Y N 0 2.208 -2.58 -0.042
4 C13 C C4 N Y N 0 -0.204 -1.301 -0.032
5 C17 C C5 N Y N 0 -3.108 1.048 -0.062
6 C20 C C6 N Y N 0 -5.865 0.836 0.047
7 C21 C C7 N Y N 0 -5.096 -0.309 0.086
8 C22 C C8 N Y N 0 -3.704 -0.212 0.032
9 C1 C C9 N N N 0 2.333 2.797 1.297
10 C2 C C10 N N N 0 2.27 1.937 0.033
11 C3 C C11 N N N 0 2.343 2.838 -1.201
12 N4 N N1 N Y N 0 3.397 1.001 0.023
13 N6 N N2 N Y N 0 5.385 0.19 0.013
14 C12 C C14 N Y N 0 -0.172 -2.692 -0.055
15 N7 N N3 N Y N 0 4.573 -0.807 -0.011
16 C9 C C12 N Y N 0 2.106 -1.19 -0.02
17 C11 C C13 N Y N 0 1.051 -3.342 -0.06
18 N14 N N4 N Y N 0 0.916 -0.599 -0.015
19 N15 N N5 N N N 0 -1.43 -0.64 -0.026
20 C16 C C15 N N N 0 -1.619 0.812 -0.108
21 C18 C C16 N Y N 0 -3.884 2.183 -0.101
22 C19 C C17 N Y N 0 -5.265 2.079 -0.046
23 C23 C C18 N N N 0 -2.636 -1.229 0.053
24 O24 O O1 N N N 0 -2.82 -2.428 0.132
25 H1 H H1 N N N 0 5.136 2.306 0.052
26 H2 H H2 N N N 0 3.177 -3.057 -0.05
27 H3 H H3 N N N 0 -6.942 0.762 0.089
28 H4 H H4 N N N 0 -5.569 -1.277 0.159
29 H5 H H5 N N N 0 3.269 3.355 1.31
30 H6 H H6 N N N 0 1.494 3.493 1.305
31 H7 H H7 N N N 0 2.28 2.155 2.176
32 H8 H H8 N N N 0 1.334 1.378 0.02
33 H9 H H9 N N N 0 3.279 3.397 -1.188
34 H10 H H10 N N N 0 2.299 2.225 -2.102
35 H11 H H11 N N N 0 1.505 3.534 -1.193
36 H12 H H12 N N N 0 1.102 -4.421 -0.078
37 H13 H H13 N N N 0 -1.091 -3.259 -0.069
38 H14 H H14 N N N 0 -1.204 1.193 -1.041
39 H15 H H15 N N N 0 -1.14 1.3 0.742
40 H16 H H16 N N N 0 -3.418 3.154 -0.173
41 H17 H H17 N N N 0 -5.873 2.97 -0.076