Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 8H6

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 56


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O1 O O1 N N N 0 7.582 1.911 2.051
2 O17 O O2 N N N 0 5.711 -1.828 0.193
3 C5 C C1 N N N 0 5.583 -0.797 -0.432
4 C4 C C2 R N N 0 6.793 -0.113 -1.014
5 C3 C C3 N N N 0 7.119 1.134 -0.19
6 C15 C C4 N N N 0 5.983 2.15 -0.331
7 C2 C C5 N N N 0 7.277 0.747 1.281
8 C14 C C6 N N N 0 8.423 1.754 -0.697
9 O16 O O3 N N N 0 7.906 -1.008 -0.984
10 N6 N N1 N N N 0 4.358 -0.263 -0.607
11 C7 C C7 N N N 0 3.171 -0.982 -0.136
12 C8 C C8 N N N 0 1.919 -0.163 -0.456
13 C9 C C9 N N N 0 0.698 -0.903 0.029
14 O18 O O4 N N N 0 0.818 -1.978 0.576
15 N10 N N2 N N N 0 -0.527 -0.368 -0.146
16 C11 C C10 N N N 0 -1.713 -1.087 0.325
17 C12 C C11 N N N 0 -2.966 -0.269 0.005
18 S13 S S1 N N N 0 -4.432 -1.157 0.587
19 C19 C C12 N N N 0 -5.654 -0.053 0.117
20 O24 O O5 N N N 0 -5.355 0.981 -0.443
21 C20 C C13 R N N 0 -7.101 -0.366 0.399
22 C26 C C14 N N N 0 -7.488 -1.668 -0.305
23 C21 C C15 N N N 0 -7.966 0.757 -0.11
24 O25 O O6 N N N 0 -7.613 1.406 -1.066
25 C22 C C16 N N N 0 -9.272 1.071 0.572
26 C23 C C17 N N N 0 -9.949 2.246 -0.137
27 H1 H H1 N N N 0 7.696 1.74 2.996
28 H2 H H2 N N N 0 6.587 0.176 -2.045
29 H3 H H3 N N N 0 5.788 2.332 -1.388
30 H4 H H4 N N N 0 5.084 1.756 0.142
31 H5 H H5 N N N 0 6.269 3.084 0.152
32 H6 H H6 N N N 0 8.086 0.023 1.382
33 H7 H H7 N N N 0 6.348 0.305 1.643
34 H8 H H8 N N N 0 8.685 2.609 -0.075
35 H9 H H9 N N N 0 9.22 1.012 -0.65
36 H10 H H10 N N N 0 8.292 2.081 -1.729
37 H11 H H11 N N N 0 8.147 -1.308 -0.096
38 H12 H H12 N N N 0 4.262 0.597 -1.044
39 H13 H H13 N N N 0 3.11 -1.949 -0.635
40 H14 H H14 N N N 0 3.241 -1.133 0.941
41 H15 H H15 N N N 0 1.98 0.804 0.043
42 H16 H H16 N N N 0 1.848 -0.012 -1.533
43 H17 H H17 N N N 0 -0.623 0.492 -0.584
44 H18 H H18 N N N 0 -1.774 -2.054 -0.174
45 H19 H H19 N N N 0 -1.643 -1.238 1.402
46 H20 H H20 N N N 0 -2.905 0.698 0.504
47 H21 H H21 N N N 0 -3.036 -0.118 -1.072
48 H22 H H22 N N N 0 -7.245 -0.477 1.474
49 H23 H H23 N N N 0 -6.861 -2.481 0.064
50 H24 H H24 N N N 0 -8.534 -1.895 -0.101
51 H25 H H25 N N N 0 -7.343 -1.557 -1.38
52 H26 H H26 N N N 0 -9.923 0.198 0.531
53 H27 H H27 N N N 0 -9.084 1.335 1.613
54 H28 H H28 N N N 0 -10.894 2.473 0.357
55 H29 H H29 N N N 0 -9.299 3.119 -0.096
56 H30 H H30 N N N 0 -10.137 1.982 -1.178