Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 8J7

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 46


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C10 C C1 N Y N 0 -3.228 0.41 0.268
2 C11 C C2 N N N 0 -5.32 -2.688 -0.555
3 C22 C C6 N Y N 0 2.942 2.235 -0.219
4 C12 C C3 N N N 0 0.525 0.155 0.594
5 C13 C C4 N N N 0 1.155 0.562 -0.74
6 C21 C C5 N Y N 0 2.6 0.93 -0.521
7 C26 C C10 N Y N 0 3.583 -0.038 -0.616
8 C23 C C7 N Y N 0 4.267 2.573 -0.018
9 C24 C C8 N Y N 0 5.25 1.607 -0.119
10 C25 C C9 N Y N 0 4.908 0.301 -0.42
11 C27 C C11 N N N 0 5.98 -0.752 -0.53
12 C29 C C12 N N N 0 7.235 -2.406 0.716
13 N02 N N1 N N N 0 -6.42 2.016 0.277
14 C02 C C13 N Y N 0 -5.457 1.024 0.174
15 N01 N N2 N Y N 0 -4.19 1.335 0.357
16 C03 C C14 N Y N 0 -5.854 -0.289 -0.122
17 C04 C C15 N Y N 0 -4.918 -1.271 -0.237
18 C05 C C16 N Y N 0 -3.564 -0.932 -0.034
19 C06 C C17 N Y N 0 -2.55 -1.897 -0.126
20 C07 C C18 N Y N 0 -1.253 -1.533 0.077
21 C08 C C19 N Y N 0 -0.92 -0.214 0.375
22 C09 C C20 N Y N 0 -1.878 0.749 0.464
23 N28 N N3 N N N 0 6.195 -1.371 0.785
24 H1 H H1 N N N 0 -5.33 -2.83 -1.636
25 H2 H H2 N N N 0 -4.606 -3.378 -0.105
26 H3 H H3 N N N 0 -6.314 -2.882 -0.154
27 H4 H H4 N N N 0 1.061 -0.702 1.002
28 H5 H H5 N N N 0 0.585 0.988 1.293
29 H6 H H6 N N N 0 1.095 -0.272 -1.44
30 H7 H H7 N N N 0 0.619 1.418 -1.149
31 H8 H H8 N N N 0 2.174 2.99 -0.141
32 H9 H H9 N N N 0 4.535 3.593 0.217
33 H10 H H10 N N N 0 6.286 1.871 0.038
34 H14 H H14 N N N 0 6.932 -3.18 0.011
35 H11 H H11 N N N 0 3.315 -1.058 -0.848
36 H12 H H12 N N N 0 5.668 -1.515 -1.243
37 H13 H H13 N N N 0 6.907 -0.293 -0.871
38 H15 H H15 N N N 0 8.171 -1.958 0.384
39 H16 H H16 N N N 0 7.374 -2.848 1.703
40 H17 H H17 N N N 0 -6.158 2.927 0.481
41 H18 H H18 N N N 0 -7.356 1.799 0.144
42 H19 H H19 N N N 0 -6.899 -0.517 -0.268
43 H20 H H20 N N N 0 -2.796 -2.923 -0.356
44 H21 H H21 N N N 0 -0.473 -2.277 0.006
45 H22 H H22 N N N 0 -1.603 1.768 0.691
46 H23 H H23 N N N 0 6.422 -0.675 1.48