Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 8S3

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 39


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C10 C C1 N Y N 0 1.125 1.092 0.065
2 C11 C C2 N Y N 0 -0.19 0.886 -0.3
3 C13 C C3 N Y N 0 -0.567 -0.309 -0.902
4 C15 C C4 N Y N 0 -2.917 0.154 -0.605
5 C16 C C5 N Y N 0 -3.623 1.166 -1.244
6 C17 C C6 N Y N 0 -4.633 1.83 -0.579
7 C18 C C7 N Y N 0 -4.952 1.495 0.728
8 C19 C C8 N Y N 0 -4.264 0.495 1.378
9 C20 C C9 N Y N 0 -3.241 -0.192 0.717
10 C21 C C10 N N N 0 -2.502 -1.263 1.406
11 O23 O O1 N N N 0 -2.726 -1.503 2.714
12 O22 O O2 N N N 0 -1.69 -1.93 0.796
13 N14 N N1 N N N 0 -1.9 -0.516 -1.271
14 C02 C C11 N Y N 0 0.381 -1.299 -1.139
15 CL1 CL CL1 N N N 0 -0.091 -2.79 -1.893
16 CL2 CL CL2 N N N 0 -1.376 2.119 -0.005
17 C04 C C12 N Y N 0 2.076 0.101 -0.172
18 C03 C C13 N Y N 0 1.697 -1.096 -0.776
19 C05 C C14 N Y N 0 3.492 0.323 0.214
20 C09 C C15 N Y N 0 4.225 -0.344 1.154
21 C24 C C16 N N N 0 3.757 -1.479 2.028
22 O08 O O3 N Y N 0 5.445 0.211 1.142
23 N07 N N2 N Y N 0 5.524 1.104 0.332
24 C06 C C17 N Y N 0 4.407 1.278 -0.311
25 C25 C C18 N N N 0 4.135 2.29 -1.394
26 H1 H H1 N N N 0 1.417 2.022 0.53
27 H2 H H2 N N N 0 -3.38 1.433 -2.262
28 H3 H H3 N N N 0 -5.178 2.616 -1.08
29 H4 H H4 N N N 0 -5.742 2.024 1.24
30 H5 H H5 N N N 0 -4.517 0.238 2.396
31 H6 H H6 N N N 0 -2.216 -2.216 3.122
32 H7 H H7 N N N 0 -2.114 -1.128 -1.993
33 H8 H H8 N N N 0 2.433 -1.865 -0.96
34 H9 H H9 N N N 0 3.945 -2.427 1.525
35 H10 H H10 N N N 0 4.298 -1.456 2.974
36 H11 H H11 N N N 0 2.689 -1.374 2.218
37 H12 H H12 N N N 0 3.77 3.213 -0.945
38 H13 H H13 N N N 0 5.056 2.492 -1.942
39 H14 H H14 N N N 0 3.384 1.896 -2.079