Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Atoms of Molecule

 Molecule : 8VU

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 54


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C10 C C1 N N N 0 1.471 0.977 -0.519
2 C13 C C2 R N N 0 3.877 0.701 -0.943
3 C17 C C3 N N N 0 3.007 2.745 0.233
4 C26 C C4 N N N 0 3.828 -3.54 -0.556
5 C03 C C8 N Y N 0 -3.623 -0.26 1.312
6 C28 C C5 N N N 0 2.232 -3.217 1.339
7 C01 C C6 N Y N 0 -5.698 -0.651 0.178
8 C02 C C7 N Y N 0 -4.784 -0.998 1.157
9 C04 C C9 N Y N 0 -3.376 0.824 0.488
10 C05 C C10 N Y N 0 -4.288 1.171 -0.491
11 C06 C C11 N Y N 0 -5.449 0.435 -0.647
12 C07 C C12 N N N 0 -2.112 1.627 0.658
13 C08 C C13 R N N 0 -0.976 0.961 -0.122
14 C09 C C14 N N N 0 0.333 1.704 0.15
15 N11 N N1 N N N 0 2.728 1.452 -0.415
16 O12 O O1 N N N 0 1.257 -0.038 -1.147
17 C14 C C15 N N N 0 5.0 0.762 0.055
18 N15 N N2 N N N 0 5.006 1.6 1.093
19 C16 C C16 N N N 0 3.906 2.488 1.444
20 O18 O O2 N N N 0 5.944 0.014 -0.089
21 N19 N N3 N N N 0 -1.276 1.009 -1.559
22 F20 F F1 N N N 0 -6.341 0.775 -1.604
23 F21 F F2 N N N 0 -6.829 -1.374 0.022
24 F22 F F3 N N N 0 -2.73 -0.599 2.269
25 C23 C C17 N N N 0 3.473 -0.757 -1.173
26 O24 O O3 N N N 0 3.056 -1.336 0.065
27 C25 C C18 N N N 0 2.656 -2.704 -0.039
28 C27 C C19 N N N 0 1.48 -2.819 -1.01
29 H131 H H1 N N N 0 4.199 1.143 -1.886
30 H172 H H2 N N N 0 3.516 3.406 -0.469
31 H171 H H3 N N N 0 2.074 3.204 0.558
32 H3 H H4 N N N 0 4.666 -3.458 0.137
33 H1 H H5 N N N 0 3.523 -4.583 -0.635
34 H2 H H6 N N N 0 4.131 -3.174 -1.537
35 H5 H H7 N N N 0 3.069 -3.135 2.031
36 H6 H H8 N N N 0 1.396 -2.621 1.707
37 H4 H H9 N N N 0 1.926 -4.26 1.259
38 H021 H H10 N N N 0 -4.977 -1.844 1.801
39 H051 H H11 N N N 0 -4.095 2.017 -1.133
40 H072 H H12 N N N 0 -2.269 2.637 0.28
41 H071 H H13 N N N 0 -1.849 1.671 1.715
42 H7 H H14 N N N 0 -0.878 -0.077 0.194
43 H092 H H15 N N N 0 0.511 1.746 1.225
44 H091 H H16 N N N 0 0.266 2.717 -0.247
45 H8 H H17 N N N 0 5.798 1.62 1.653
46 H161 H H18 N N N 0 4.31 3.437 1.799
47 H162 H H19 N N N 0 3.316 2.031 2.238
48 H10 H H20 N N N 0 -2.102 0.47 -1.774
49 H9 H H21 N N N 0 -1.373 1.961 -1.878
50 H231 H H23 N N N 0 2.652 -0.798 -1.889
51 H232 H H24 N N N 0 4.326 -1.312 -1.565
52 H14 H H25 N N N 0 1.175 -3.862 -1.09
53 H12 H H26 N N N 0 0.645 -2.223 -0.642
54 H13 H H27 N N N 0 1.782 -2.453 -1.992