Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 909

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 65


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 -2.11 -1.112 -0.526
2 C11 C C2 N N N 0 -7.61 -0.878 -0.812
3 C12 C C3 N N N 0 -6.091 -1.02 -0.684
4 C13 C C4 N N N 0 -7.936 -1.064 1.581
5 C15 C C5 N Y N 0 0.241 1.533 -0.113
6 C17 C C6 N Y N 0 1.572 2.139 0.014
7 C18 C C7 N Y N 0 2.779 1.461 -0.015
8 C19 C C8 N Y N 0 3.82 2.488 0.149
9 C2 C C9 N Y N 0 -1.33 0.038 -0.356
10 C20 C C10 N Y N 0 3.156 3.695 0.264
11 C22 C C11 N N N 0 3.812 5.04 0.449
12 C23 C C12 N N N 0 5.268 2.274 0.184
13 C24 C C13 N N N 0 6.072 2.353 -1.087
14 C25 C C14 N Y N 0 2.98 0.004 -0.178
15 C26 C C15 N Y N 0 3.529 -0.747 0.863
16 C27 C C16 N Y N 0 3.715 -2.103 0.708
17 C28 C C17 N Y N 0 3.356 -2.724 -0.483
18 C29 C C18 N Y N 0 2.809 -1.979 -1.521
19 C3 C C19 N Y N 0 -1.96 1.29 -0.234
20 C30 C C20 N Y N 0 2.615 -0.623 -1.37
21 C32 C C21 N N N 0 3.414 -4.922 0.424
22 C34 C C22 N N N 0 3.735 -6.388 0.286
23 C4 C C23 N Y N 0 -3.343 1.376 -0.283
24 C5 C C24 N Y N 0 -4.097 0.226 -0.451
25 C6 C C25 N Y N 0 -3.47 -1.013 -0.577
26 C8 C C26 N N N 0 -6.023 0.961 0.704
27 C9 C C27 N N N 0 -7.541 1.104 0.577
28 N10 N N1 N N N 0 -8.141 -0.225 0.393
29 N14 N N2 N Y N 0 -0.948 2.219 -0.082
30 N16 N N3 N Y N 0 0.006 0.25 -0.275
31 N21 N N4 N Y N 0 1.834 3.479 0.178
32 N31 N N5 N N N 0 3.547 -4.101 -0.637
33 N7 N N6 N N N 0 -5.491 0.308 -0.5
34 O33 O O1 N N N 0 3.036 -4.482 1.489
35 O35 O O2 N N N 0 5.82 2.033 1.238
36 H1 H H1 N N N 0 -1.634 -2.077 -0.62
37 H2 H H2 N N N 0 -7.846 -0.273 -1.687
38 H3 H H3 N N N 0 -8.06 -1.865 -0.919
39 H4 H H4 N N N 0 -5.856 -1.648 0.176
40 H5 H H5 N N N 0 -5.692 -1.478 -1.589
41 H6 H H6 N N N 0 -6.869 -1.241 1.721
42 H7 H H7 N N N 0 -8.338 -0.558 2.458
43 H8 H H8 N N N 0 -8.447 -2.018 1.446
44 H9 H H9 N N N 0 4.068 5.457 -0.525
45 H10 H H10 N N N 0 3.124 5.711 0.963
46 H11 H H11 N N N 0 4.718 4.923 1.044
47 H12 H H12 N N N 0 6.476 3.36 -1.2
48 H13 H H13 N N N 0 6.892 1.636 -1.044
49 H14 H H14 N N N 0 5.431 2.122 -1.938
50 H15 H H15 N N N 0 3.809 -0.265 1.788
51 H16 H H16 N N N 0 4.14 -2.685 1.513
52 H17 H H17 N N N 0 2.532 -2.465 -2.445
53 H18 H H18 N N N 0 2.185 -0.046 -2.175
54 H19 H H19 N N N 0 3.569 -6.888 1.241
55 H20 H H20 N N N 0 3.09 -6.832 -0.473
56 H21 H H21 N N N 0 4.778 -6.506 -0.009
57 H22 H H22 N N N 0 -3.831 2.335 -0.186
58 H23 H H23 N N N 0 -4.067 -1.903 -0.708
59 H24 H H24 N N N 0 -5.573 1.948 0.812
60 H25 H H25 N N N 0 -5.787 0.357 1.58
61 H26 H H26 N N N 0 -7.941 1.561 1.481
62 H27 H H27 N N N 0 -7.777 1.731 -0.283
63 H29 H H29 N N N 0 -1.057 3.177 0.028
64 H31 H H31 N N N 0 1.157 4.171 0.23
65 H32 H H32 N N N 0 3.774 -4.465 -1.507