Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 9VT

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 31


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C10 C C1 N Y N 0 -2.416 0.068 0.098
2 N12 N N1 N Y N 0 -0.789 -0.736 1.33
3 C13 C C2 N Y N 0 -0.152 0.353 1.048
4 C20 C C3 N N N 0 4.536 -2.27 -0.782
5 C24 C C4 N Y N 0 3.593 0.115 -1.132
6 C26 C C5 N Y N 0 2.698 0.911 -0.502
7 C01 C C6 N N N 0 -5.865 -0.77 -1.13
8 C05 C C7 N N N 0 -4.577 -1.041 -0.35
9 N08 N N2 N N N 0 -3.657 0.087 -0.52
10 N11 N N3 N Y N 0 -1.944 -0.887 0.848
11 C14 C C8 N N N 0 1.23 0.721 1.524
12 N17 N N4 N Y N 0 2.223 0.233 0.564
13 N18 N N5 N Y N 0 2.847 -1.021 0.59
14 C19 C C9 N Y N 0 3.663 -1.093 -0.43
15 C27 C C10 N N N 0 2.302 2.305 -0.916
16 S31 S S1 N Y N 0 -1.186 1.331 0.005
17 H21 H H1 N N N 0 3.991 -2.942 -1.444
18 H22 H H2 N N N 0 5.437 -1.916 -1.285
19 H23 H H3 N N N 0 4.813 -2.802 0.128
20 H25 H H4 N N N 0 4.151 0.366 -2.022
21 H02 H H5 N N N 0 -6.333 0.14 -0.754
22 H03 H H6 N N N 0 -5.631 -0.648 -2.187
23 H04 H H7 N N N 0 -6.55 -1.609 -1.003
24 H06 H H8 N N N 0 -4.811 -1.163 0.708
25 H07 H H9 N N N 0 -4.109 -1.951 -0.725
26 H09 H H10 N N N 0 -3.916 0.846 -1.065
27 H16 H H11 N N N 0 1.309 1.805 1.608
28 H15 H H12 N N N 0 1.412 0.267 2.498
29 H29 H H13 N N N 0 1.453 2.254 -1.598
30 H30 H H14 N N N 0 2.025 2.881 -0.034
31 H28 H H15 N N N 0 3.142 2.787 -1.417