Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : 9XT

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 39


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N N N 0 5.662 0.192 2.105
2 N3 N N2 N Y N 0 -0.039 1.372 -1.574
3 C4 C C1 N Y N 0 2.805 -0.242 -0.892
4 C5 C C2 N Y N 0 3.031 -1.274 0.0
5 C6 C C3 N Y N 0 3.978 -1.134 0.996
6 C7 C C4 N Y N 0 4.704 0.046 1.1
7 C8 C C5 N N N 0 1.77 -0.399 -1.977
8 C10 C C6 N Y N 0 -2.677 -0.323 0.096
9 C13 C C7 N Y N 0 -3.823 0.542 0.419
10 C15 C C8 N Y N 0 -5.879 1.304 0.781
11 C1 C C9 N N N 0 5.259 2.363 0.311
12 C11 C C10 N Y N 0 -1.655 -2.4 0.14
13 C12 C C11 N Y N 0 -0.479 -0.681 -0.848
14 C14 C C12 N Y N 0 -5.134 0.169 0.414
15 C16 C C13 N Y N 0 -4.999 2.304 0.993
16 C2 C C14 N Y N 0 4.474 1.081 0.202
17 C3 C C15 N Y N 0 3.521 0.936 -0.788
18 C9 C C16 N Y N 0 -1.543 0.197 -0.569
19 N2 N N3 N Y N 0 0.472 0.068 -1.485
20 N4 N N4 N Y N 0 -1.207 1.411 -1.034
21 N5 N N5 N Y N 0 -2.683 -1.614 0.426
22 N6 N N6 N Y N 0 -0.574 -1.955 -0.481
23 N7 N N7 N N N 0 -1.713 -3.734 0.505
24 O1 O O1 N Y N 0 -3.759 1.841 0.775
25 H1 H H1 N N N 0 6.168 1.016 2.177
26 H2 H H2 N N N 0 5.819 -0.53 2.734
27 H3 H H3 N N N 0 2.466 -2.191 -0.081
28 H4 H H4 N N N 0 4.153 -1.94 1.692
29 H5 H H5 N N N 0 2.063 0.19 -2.846
30 H6 H H6 N N N 0 1.696 -1.449 -2.258
31 H7 H H7 N N N 0 -6.953 1.363 0.875
32 H8 H H8 N N N 0 6.165 2.286 -0.29
33 H9 H H9 N N N 0 4.652 3.193 -0.051
34 H10 H H10 N N N 0 5.528 2.536 1.353
35 H11 H H11 N N N 0 -5.525 -0.809 0.175
36 H12 H H12 N N N 0 -5.251 3.312 1.289
37 H13 H H13 N N N 0 3.343 1.74 -1.486
38 H14 H H14 N N N 0 -2.496 -4.078 0.962
39 H15 H H15 N N N 0 -0.97 -4.325 0.304