Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : A1AIP

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 61


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 N1 N N1 N Y N 0 6.335 -3.023 0.121
2 N3 N N2 N Y N 0 0.858 2.903 0.674
3 C4 C C1 N Y N 0 5.346 -1.07 0.199
4 C5 C C2 N Y N 0 4.322 -0.014 0.371
5 C6 C C3 N Y N 0 3.026 -0.11 -0.016
6 C7 C C4 N Y N 0 2.385 1.15 0.344
7 C8 C C5 N Y N 0 1.088 1.675 0.219
8 C10 C C6 N Y N 0 -2.28 0.382 -0.554
9 C13 C C7 N Y N 0 -4.166 -1.661 -0.693
10 C15 C C8 N Y N 0 -3.485 0.493 0.107
11 C17 C C9 N N N 0 -6.124 -2.936 0.275
12 C20 C C10 N N N 0 -0.33 3.477 -1.689
13 C21 C C11 N N N 0 -1.061 1.463 -2.975
14 C22 C C12 N Y N 0 1.821 3.614 1.231
15 O1 O O1 N N N 0 -6.42 0.939 0.538
16 S S S1 N N N 0 -5.925 -0.327 0.951
17 O O O2 N N N 0 -5.556 -0.567 2.302
18 C16 C C13 N N N 0 -6.985 -1.665 0.327
19 C18 C C14 N N N 0 -5.118 -2.808 -0.856
20 C12 C C15 N Y N 0 -2.942 -1.77 -1.353
21 C11 C C16 N Y N 0 -2.008 -0.759 -1.285
22 C14 C C17 N Y N 0 -4.423 -0.529 0.044
23 C9 C C18 S N N 0 -1.27 1.499 -0.485
24 C19 C C19 N N N 0 -1.355 2.343 -1.758
25 N2 N N3 N N N 0 0.076 0.933 -0.364
26 N4 N N4 N Y N 0 3.05 3.164 1.37
27 C23 C C20 N Y N 0 3.38 1.945 0.945
28 N5 N N5 N Y N 0 4.539 1.217 0.948
29 C1 C C21 N Y N 0 6.691 -0.874 -0.176
30 C C C22 N N N 0 7.342 0.452 -0.474
31 C3 C C23 N Y N 0 5.16 -2.412 0.375
32 N N N6 N Y N 0 7.274 -2.042 -0.22
33 C2 C C24 N N N 0 6.587 -4.464 0.196
34 H9 H H1 N N N 0 2.558 -0.956 -0.498
35 H13 H H2 N N N 0 -3.702 1.383 0.679
36 H16 H H3 N N N 0 -5.596 -3.057 1.221
37 H17 H H4 N N N 0 -6.762 -3.802 0.101
38 H22 H H5 N N N 0 -0.54 4.104 -0.822
39 H21 H H6 N N N 0 0.671 3.056 -1.598
40 H23 H H7 N N N 0 -0.391 4.078 -2.596
41 H25 H H8 N N N 0 -0.059 1.042 -2.884
42 H26 H H9 N N N 0 -1.791 0.655 -3.024
43 H24 H H10 N N N 0 -1.122 2.064 -3.882
44 H27 H H11 N N N 0 1.591 4.608 1.588
45 H15 H H12 N N N 0 -7.345 -1.419 -0.672
46 H14 H H13 N N N 0 -7.829 -1.815 1.0
47 H18 H H14 N N N 0 -5.662 -2.679 -1.792
48 H19 H H15 N N N 0 -4.543 -3.732 -0.916
49 H12 H H16 N N N 0 -2.723 -2.659 -1.925
50 H11 H H17 N N N 0 -1.065 -0.859 -1.802
51 H H H18 N N N 0 -1.48 2.126 0.381
52 H20 H H19 N N N 0 -2.357 2.764 -1.849
53 H10 H H20 N N N 0 0.258 0.039 -0.692
54 H1 H H21 N N N 0 5.388 1.524 1.304
55 H4 H H22 N N N 0 7.237 0.678 -1.535
56 H3 H H23 N N N 0 6.861 1.234 0.114
57 H2 H H24 N N N 0 8.4 0.403 -0.216
58 H8 H H25 N N N 0 4.239 -2.896 0.665
59 H7 H H26 N N N 0 6.385 -4.919 -0.774
60 H5 H H27 N N N 0 7.628 -4.637 0.469
61 H6 H H28 N N N 0 5.936 -4.908 0.949