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PDBeChem : Atoms of Molecule
Molecule : A1AKD
Atoms of a chemical element, that composes a molecule
Total Number of Atoms: 36
Record |
Atom Name |
Symbol |
PDB Name |
Stereochemistry |
Is Aromatic |
Is Leaving Atom |
Charge |
X-Coordinate |
Y-Coordinate |
Z-Coordinate |
1 |
N1 |
N |
N1 |
N |
N |
N |
0 |
-0.426 |
-0.491 |
0.018 |
2 |
N3 |
N |
N2 |
N |
Y |
N |
0 |
2.983 |
1.72 |
-0.533 |
3 |
C4 |
C |
C1 |
N |
N |
N |
0 |
-2.837 |
-0.579 |
-0.31 |
4 |
C5 |
C |
C2 |
N |
N |
N |
0 |
-1.519 |
-2.654 |
-0.275 |
5 |
C6 |
C |
C3 |
N |
N |
N |
0 |
-0.377 |
-1.75 |
-0.744 |
6 |
C7 |
C |
C4 |
N |
Y |
N |
0 |
0.731 |
0.243 |
-0.163 |
7 |
C8 |
C |
C5 |
N |
Y |
N |
0 |
1.785 |
2.2 |
-0.786 |
8 |
C10 |
C |
C6 |
N |
Y |
N |
0 |
3.801 |
-1.529 |
0.676 |
9 |
O |
O |
O1 |
N |
N |
N |
0 |
-3.925 |
-0.045 |
-0.285 |
10 |
N |
N |
N3 |
N |
N |
N |
0 |
-2.778 |
-1.914 |
-0.285 |
11 |
C3 |
C |
C7 |
R |
N |
N |
0 |
-1.61 |
0.288 |
-0.368 |
12 |
C1 |
C |
C8 |
N |
N |
N |
0 |
-1.777 |
1.468 |
0.592 |
13 |
C2 |
C |
C9 |
N |
N |
N |
0 |
-2.904 |
2.375 |
0.095 |
14 |
C |
C |
C10 |
N |
N |
N |
0 |
-2.121 |
0.945 |
1.988 |
15 |
C12 |
C |
C11 |
N |
Y |
N |
0 |
1.988 |
-0.312 |
0.121 |
16 |
C11 |
C |
C12 |
N |
Y |
N |
0 |
2.462 |
-1.605 |
0.611 |
17 |
N4 |
N |
N4 |
N |
Y |
N |
0 |
4.216 |
-0.288 |
0.265 |
18 |
C9 |
C |
C13 |
N |
Y |
N |
0 |
3.136 |
0.476 |
-0.081 |
19 |
N2 |
N |
N5 |
N |
Y |
N |
0 |
0.681 |
1.495 |
-0.611 |
20 |
H10 |
H |
H1 |
N |
N |
N |
0 |
-1.598 |
-3.512 |
-0.942 |
21 |
H11 |
H |
H2 |
N |
N |
N |
0 |
-1.311 |
-3.0 |
0.738 |
22 |
H12 |
H |
H3 |
N |
N |
N |
0 |
-0.491 |
-1.538 |
-1.807 |
23 |
H13 |
H |
H4 |
N |
N |
N |
0 |
0.578 |
-2.246 |
-0.568 |
24 |
H14 |
H |
H5 |
N |
N |
N |
0 |
1.699 |
3.213 |
-1.151 |
25 |
H15 |
H |
H6 |
N |
N |
N |
0 |
4.454 |
-2.325 |
1.003 |
26 |
H9 |
H |
H7 |
N |
N |
N |
0 |
-3.609 |
-2.415 |
-0.273 |
27 |
H8 |
H |
H8 |
N |
N |
N |
0 |
-1.481 |
0.664 |
-1.382 |
28 |
H4 |
H |
H9 |
N |
N |
N |
0 |
-0.847 |
2.034 |
0.636 |
29 |
H6 |
H |
H10 |
N |
N |
N |
0 |
-3.858 |
1.856 |
0.193 |
30 |
H7 |
H |
H11 |
N |
N |
N |
0 |
-2.924 |
3.288 |
0.69 |
31 |
H5 |
H |
H12 |
N |
N |
N |
0 |
-2.733 |
2.626 |
-0.951 |
32 |
H1 |
H |
H13 |
N |
N |
N |
0 |
-3.051 |
0.378 |
1.945 |
33 |
H2 |
H |
H14 |
N |
N |
N |
0 |
-1.318 |
0.298 |
2.343 |
34 |
H3 |
H |
H15 |
N |
N |
N |
0 |
-2.239 |
1.785 |
2.672 |
35 |
H16 |
H |
H16 |
N |
N |
N |
0 |
1.852 |
-2.458 |
0.872 |
36 |
H |
H |
H17 |
N |
N |
N |
0 |
5.14 |
0.004 |
0.225 |
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