Chemical Components in the PDB

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PDBeChem : Atoms of Molecule

 Molecule : A54

Atoms of a chemical element, that composes a molecule

Total Number of Atoms: 35


Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 C1 C C1 N Y N 0 -5.042 0.094 1.201
2 C2 C C2 N Y N 0 -4.288 -0.921 1.759
3 C3 C C3 N Y N 0 -3.001 -1.152 1.311
4 C4 C C4 N Y N 0 -2.468 -0.368 0.305
5 C5 C C5 N Y N 0 -3.222 0.647 -0.253
6 C6 C C6 N Y N 0 -4.509 0.878 0.195
7 C7 C C7 R N N 0 -1.064 -0.618 -0.182
8 C8 C C8 N N N 0 -1.112 -1.422 -1.483
9 C9 C C9 N N N 0 0.312 -1.784 -1.912
10 N10 N N10 N N N 0 0.266 -2.556 -3.161
11 O11 O O11 N N N 0 -0.411 0.631 -0.418
12 C12 C C12 N Y N 0 0.895 0.72 -0.061
13 C13 C C13 N Y N 0 1.57 -0.4 0.394
14 C14 C C14 N Y N 0 2.901 -0.308 0.757
15 C15 C C15 N Y N 0 3.569 0.904 0.668
16 C16 C C16 N Y N 0 2.912 2.028 0.217
17 C17 C C17 N Y N 0 1.568 1.946 -0.158
18 C18 C C18 N N N 0 0.882 3.11 -0.633
19 N19 N N19 N N N 0 0.337 4.032 -1.01
20 CL2 CL CL2 N N N 0 3.741 -1.716 1.328
21 H1 H H1 N N N 0 -6.05 0.271 1.548
22 H2 H H2 N N N 0 -4.704 -1.534 2.545
23 H6 H H6 N N N 0 -5.099 1.671 -0.241
24 H3 H H3 N N N 0 -2.411 -1.945 1.747
25 H5 H H5 N N N 0 -2.806 1.26 -1.039
26 H7 H H7 N N N 0 -0.512 -1.18 0.572
27 H81C H H81C N N N 0 -1.686 -2.335 -1.325
28 H82C H H82C N N N 0 -1.585 -0.825 -2.262
29 H91C H H91C N N N 0 0.887 -0.872 -2.069
30 H92C H H92C N N N 0 0.785 -2.381 -1.132
31 H101 H H101 N N N 0 -0.226 -2.049 -3.881
32 H102 H H102 N N N 0 1.195 -2.807 -3.465
33 H13 H H13 N N N 0 1.056 -1.348 0.467
34 H15 H H15 N N N 0 4.609 0.967 0.953
35 H16 H H16 N N N 0 3.436 2.97 0.15